RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PHYHD1Q5SRE7 291 aa12.15□□□□□ -0.46
SMARCA4-204ENST00000444061 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
SMARCA4-204ENST00000444061 TINAGL1Q9GZM7 467 aaPredicted RBP12.15□□□□□ -0.46
SMARCA4-204ENST00000444061 GNB4Q9HAV0 340 aa12.15□□□□□ -0.46
SMARCA4-204ENST00000444061 PLSCR4Q9NRQ2 329 aa12.15□□□□□ -0.46
SMARCA4-204ENST00000444061 A8MXE2 369 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 ST8SIA3O43173 380 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 KITLGP21583 273 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 AESQ08117 197 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 PKIBQ9C010 78 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 DENND4CQ5VZ89 1909 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 FSTP19883 344 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 AANATQ16613 207 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 PERPQ96FX8 193 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 TNFRSF19Q9NS68 423 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 PPP1R14DQ9NXH3 145 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 MTFP1Q9UDX5 166 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 RBM11P57052 281 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 EXOSC2Q13868 293 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 NEU4Q8WWR8 484 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 STARD4Q96DR4 205 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 DDOQ99489 341 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 OR2D2Q9H210 308 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 MBD3L4A6NDZ8 208 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 MBD3L3A6NE82 208 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 MBD3L5A6NJ08 208 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 YIF1AO95070 293 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 TEX261Q6UWH6 196 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 MBD3L2Q8NHZ7 208 aaPredicted RBP12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 KPTNQ9Y664 436 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 U3KQ87 197 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 AKAP6Q13023 2319 aa12.14□□□□□ -0.47
SMARCA4-204ENST00000444061 TRDCB7Z8K6 153 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 FCGR3BO75015 233 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 FABP1P07148 127 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 PLA2G7Q13093 441 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 ATPAF1Q5TC12 328 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 SPNS3Q6ZMD2 512 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 CACFD1Q9UGQ2 172 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 A0A0A6YYJ9 748 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 A0A1B0GV50 99 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 AADACP22760 399 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 FGF12P61328 243 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 SLC16A12Q6ZSM3 486 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 PCNPQ8WW12 178 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 SLC35E1Q96K37 410 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 SYNGR1O43759 233 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 PMELP40967 661 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 ZIC4Q8N9L1 334 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 OR5AP2Q8NGF4 316 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 G6PC2Q9NQR9 355 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 SF3B6Q9Y3B4 125 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 ACACBO00763 2458 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 TRBV5-5A0A0J9YX44 114 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 CELA3BP08861 270 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 ADTRPQ96IZ2 230 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 KLHDC3Q9BQ90 382 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 Q9UFV3 132 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 AK3Q9UIJ7 227 aa12.13□□□□□ -0.47
SMARCA4-204ENST00000444061 TRAV39A0A0B4J263 110 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 ADH4P08319 380 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 ZP3P21754 424 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 ERVS71-1P61550 626 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 C19orf12Q9NSK7 152 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 MYLKQ15746 1914 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 PKDREJQ9NTG1 2253 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 KRASP01116 189 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 OR8G2PQ6IF36 304 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 PTPRQQ9UMZ3 2332 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 LOC390937A0A1W2PQ73 354 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 HBE1P02100 147 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 TMEM217Q8N7C4 229 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 GCM1Q9NP62 436 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 CCSO14618 274 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 BAXQ07812 192 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 TGIF2LXQ8IUE1 241 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
SMARCA4-204ENST00000444061 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 FDX2Q6P4F2 183 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 CLRN3Q8NCR9 226 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 SNX22Q96L94 193 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 ZNF714Q96N38 554 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 C1RLQ9NZP8 487 aa12.11□□□□□ -0.47
SMARCA4-204ENST00000444061 SPNP16150 400 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms