RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 OPN3Q9H1Y3 402 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 WDR13Q9H1Z4 485 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PLEKHA2Q9HB19 425 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 KCNJ16Q9NPI9 418 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 SLC2A9Q9NRM0 540 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ASF1BQ9NVP2 202 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 TAS2R3Q9NYW6 316 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 EHFQ9NZC4 300 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 KCNIP1Q9NZI2 227 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PIPOXQ9P0Z9 390 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DUX4Q9UBX2 424 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 AK3Q9UIJ7 227 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 JPT1Q9UK76 154 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 VSIG4Q9Y279 399 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OR2W1Q9Y3N9 320 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 BSNQ9UPA5 3926 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 AKAP13Q12802 2813 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 URB1O60287 2271 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 CELSR3Q9NYQ7 3312 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ATMQ13315 3056 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TANC2Q9HCD6 1990 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 HEATR1Q9H583 2144 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 A0A087X0M5 115 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TRBV23-1A0A0A0MS06 115 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TRAV38-1A0A0B4J264 116 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TEX13DA0A0J9YY54 714 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1B0GU03 582 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1B0GX30 115 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1W2PP11 408 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 A0A1W2PPH5 198 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF729A6NN14 1252 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 C17orf100A8MU93 164 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 H0Y980 276 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 BOLA2-SMG1P6H3BVE0 249 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 K7EM74 188 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 M0QYG6 137 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CDIPTO14735 213 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TNFRSF13BO14836 293 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 MPPED1O15442 326 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SPINT2O43291 252 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SYNGR1O43759 233 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ANGPTL7O43827 346 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TSC22D2O75157 780 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF737O75373 536 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TSPAN9O75954 239 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 JTBO76095 146 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 OR2H2O95918 312 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 HAND1O96004 215 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PMP2P02689 132 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 GAPDHP04406 335 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CD3EP07766 207 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CELA3BP08861 270 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CGB3P0DN86 165 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CGB7P0DN87 165 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 VSIG10L2P0DP72 767 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PTHLHP12272 177 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CCL2P13500 99 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 IRF2P14316 349 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF44P15621 663 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ANXA7P20073 488 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 BMP5P22003 454 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ANOS1P23352 680 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PTPRZ1P23471 2315 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 F2RP25116 425 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 DUSP1P28562 367 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 GNRHRP30968 328 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 FCGR2CP31995 323 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PRDX2P32119 198 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SERPINF1P36955 418 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 NUP62P37198 522 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 RBMXP38159 391 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PLA2G5P39877 138 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 KIR2DS2P43631 304 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 NPY4RP50391 375 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 RAB7AP51149 207 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 FABP6P51161 128 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF81P51508 661 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 LUMP51884 338 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 H2BFSP57053 126 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PIGPP57054 158 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TAS2R30P59541 319 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 BPIFB3P59826 476 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SUPT4H1P63272 117 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 CD83Q01151 205 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 FAM27E3Q08E93 113 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PPP1R1AQ13522 171 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 TMEM187Q14656 261 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 C21orf62-AS1Q17RA5 79 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PIGYQ3MUY2 71 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 LGALSLQ3ZCW2 172 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 SCGB2B2Q4G0G5 96 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 AARDQ4LEZ3 155 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 ABCA11PQ4W5N1 156 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 MIDNQ504T8 468 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 C4orf17Q53FE4 359 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PDLIM3Q53GG5 364 aaPredicted RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 PAN3Q58A45 887 aaKnown RBP2.38□□□□□ -2.03
LINC00393-201ENST00000443621 C9orf135Q5VTT2 229 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 OR52W1Q6IF63 320 aa2.38□□□□□ -2.03
LINC00393-201ENST00000443621 C11orf87Q6NUJ2 197 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms