RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CT45A6P0DMU7 189 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 CT45A5P0DMU8 189 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 CT45A7P0DMV0 189 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 GGT1P19440 569 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 HIST3H3Q16695 136 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 CT45A1Q5HYN5 189 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM184AQ6ZMB5 413 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 SPICQ8N5J4 248 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 PRR26Q8N8Z3 221 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 CT45A3Q8NHU0 189 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 CWH43Q9H720 699 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 AIG1Q9NVV5 245 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 HCSTQ9UBK5 93 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 CHST2Q9Y4C5 530 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 LSM5Q9Y4Y9 91 aaKnown RBP8.96□□□□□ -0.97
SYNE2-206ENST00000441438 COL4A2P08572 1712 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 TRAV36DV7A0A075B6V5 113 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 TRAV18A0A075B6X5 111 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 FAM166BA8MTA8 275 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 FFAR3O14843 346 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 GPR42O15529 346 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 SEMA4FO95754 770 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 ELAVL1Q15717 326 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 DMKNQ6E0U4 476 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 RPL22L1Q6P5R6 122 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 SLC35F2Q8IXU6 374 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 RELL2Q8NC24 303 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 TWIST2Q8WVJ9 160 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 CISD1Q9NZ45 108 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 RPL36Q9Y3U8 105 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 PNMA8CA0A1B0GUJ8 204 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 SRRM4A7MD48 611 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 SYNGR1O43759 233 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 GATA1P15976 413 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 RPL3P39023 403 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 AKR1C2P52895 323 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 HILS1P60008 231 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 NCS1P62166 190 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 GGTLC2Q14390 218 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 ACSF3Q4G176 576 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 OR1S2Q8NGQ3 325 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 OR5K2Q8NHB8 316 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 CABLES2Q9BTV7 478 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 C1QTNF4Q9BXJ3 329 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 GABARAPL1Q9H0R8 117 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 C5orf66Q9H5L9 145 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 TAF9BQ9HBM6 251 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 TECRQ9NZ01 308 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 FLRT3Q9NZU0 649 aa8.96□□□□□ -0.98
SYNE2-206ENST00000441438 MTCL1Q9Y4B5 1905 aaKnown RBP8.96□□□□□ -0.98
SYNE2-206ENST00000441438 NUP210Q8TEM1 1887 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 TDRD15B5MCY1 1934 aaKnown RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 A0A0A0MQY5 61 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 IDSB3KWA1 339 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 TMEM150CB9EJG8 249 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 PFN1P07737 140 aaKnown RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 PSG1P11464 419 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 CMPK1P30085 196 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 MEOX1P50221 254 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 WDR5P61964 334 aaKnown RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 SNRPNP63162 240 aaKnown RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 PIGFQ07326 219 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 EFEMP1Q12805 493 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 C1QL3Q5VWW1 255 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 C1QL4Q86Z23 238 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 LOXL4Q96JB6 756 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 ADOQ96SZ5 270 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 GALNT9Q9HCQ5 603 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 SPIN1Q9Y657 262 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF780BQ9Y6R6 833 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF816-ZNF321PA0A0X1KG74 233 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 ZNF705EA8MWA4 302 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 YIF1AO95070 293 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 HOXB9P17482 250 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-206ENST00000441438 PAGE3Q5JUK9 113 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 PQLC2Q6ZP29 291 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 BHLHA9Q7RTU4 235 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 TRIM48Q8IWZ4 208 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 DTWD1Q8N5C7 304 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 FAM24BQ8N5W8 94 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 BLNKQ8WV28 456 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 GABRG3Q99928 467 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 TBL1YQ9BQ87 522 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 NAT8BQ9UHF3 227 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 HDGFL3Q9Y3E1 203 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 WIPI2Q9Y4P8 454 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 HS3ST3B1Q9Y662 390 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 EYSQ5T1H1 3165 aa8.95□□□□□ -0.98
SYNE2-206ENST00000441438 OR5H15A6NDH6 313 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 J3QR06 171 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 MT-ND4LP03901 98 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 SLC2A2P11168 524 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-206ENST00000441438 SRIP30626 198 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 TPRX1Q8N7U7 411 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 TMEM52Q8NDY8 209 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 OR4K5Q8NGD3 323 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 OR13A1Q8NGR1 328 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 VN1R3Q9BXE9 311 aa8.94□□□□□ -0.98
SYNE2-206ENST00000441438 ZBP1Q9H171 429 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms