RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ZDHHC23Q8IYP9 409 aa11.6□□□□□ -0.55
HERPUD1-204ENST00000439977 SPSB4Q96A44 273 aa11.6□□□□□ -0.55
HERPUD1-204ENST00000439977 PRDM14Q9GZV8 571 aa11.6□□□□□ -0.55
HERPUD1-204ENST00000439977 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 NEURL1O76050 574 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 CER1O95813 267 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 HNF4GQ14541 408 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 EIF2S3LQ2VIR3 472 aaKnown RBP11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 SLC35B3Q9H1N7 401 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 LAMA5O15230 3695 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 RHBDL1O75783 438 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 SERPINA7P05543 415 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 ZNF14P17017 642 aaPredicted RBP11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 MEOX2P50222 304 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 SULT1A1P50225 295 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 LHX2P50458 406 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 HIKESHIQ53FT3 197 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 C15orf54Q8N8G6 183 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 OR2M7Q8NG81 312 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 A0A1W2PR80 420 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 K7N7A8 449 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 FGF12P61328 243 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 SSPNQ14714 243 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 CEACAM21Q3KPI0 293 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 FAM180AQ6UWF9 173 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 COLCA1Q6ZS62 124 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 ODF3L1Q8IXM7 274 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 MKXQ8IYA7 352 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 BCL2L14Q9BZR8 327 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 FAM86C1Q9NVL1 165 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 LIPGQ9Y5X9 500 aa11.59□□□□□ -0.55
HERPUD1-204ENST00000439977 PCSK5Q92824 1860 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 LINC01387J3KSC0 135 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 WRBO00258 174 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 NAPSAO96009 420 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 SOHLH1Q5JUK2 328 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 WDR5BQ86VZ2 330 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 SUMF2Q8NBJ7 301 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 HIST1H2AAQ96QV6 131 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 FOXJ2Q9P0K8 574 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 ERRFI1Q9UJM3 462 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 BOKQ9UMX3 212 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 CDS2O95674 445 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 ZNF806P0C7X5 589 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 CA6P23280 308 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 PLA2G5P39877 138 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 ABHD17BQ5VST6 288 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 OR2T2Q6IF00 324 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 NUFIP2Q7Z417 695 aaKnown RBP11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 PLEKHF2Q9H8W4 249 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 URGCP-MRPS24S4R325 110 aa11.58□□□□□ -0.56
HERPUD1-204ENST00000439977 KIAA1549Q9HCM3 1950 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 CD300LBA8K4G0 201 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 NQO2P16083 231 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 SELEP16581 610 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 ZNF16P17020 682 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 CLDN18P56856 261 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 HOXA4Q00056 320 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 TMEM267Q0VDI3 215 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 FABP9Q0Z7S8 132 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 RNASE11Q8TAA1 199 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 TMEM56Q96MV1 263 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 PBDC1Q9BVG4 233 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 ZNF703Q9H7S9 590 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 PRSS50Q9UI38 385 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 MMP24Q9Y5R2 645 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 MED13Q9UHV7 2174 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 YKT6O15498 198 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 PGLYRP1O75594 196 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 MT-ND4LP03901 98 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 IL22RA1Q8N6P7 574 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 LYRM2Q9NU23 88 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 OR1A1Q9P1Q5 309 aa11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 DIDO1Q9BTC0 2240 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-204ENST00000439977 H0YL77 283 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 TDGF1P13385 188 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 RAB5AP20339 215 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 RND3P61587 244 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 PLGLB1Q02325 96 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 ZNF266Q14584 549 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 OR1C1Q15619 314 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 CMTM1Q8IZ96 169 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 APH1AQ96BI3 265 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 TTTY12Q9BZ98 90 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 C11orf1Q9H5F2 150 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 RNF122Q9H9V4 155 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 STRAPQ9Y3F4 350 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 RBFOX3A6NFN3 312 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 C9orf172C9J069 976 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 SLC34A2O95436 690 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 SYNGR4O95473 234 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 PSG2P11465 335 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 UCP2P55851 309 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 HMGN3Q15651 99 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms