RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CYTIPO60759 359 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 AMBPP02760 352 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 CD82P27701 267 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 ZNF133P52736 654 aaPredicted RBP7.4□□□□□ -1.22
HPS4-206ENST00000439453 CLRN1P58418 232 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 TAF9Q16594 264 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 THEM4Q5T1C6 240 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 CPEB2Q7Z5Q1 589 aaKnown RBP7.4□□□□□ -1.22
HPS4-206ENST00000439453 OR6X1Q8NH79 312 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 TMEM171Q8WVE6 324 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 MRPL13Q9BYD1 178 aaKnown RBP7.4□□□□□ -1.22
HPS4-206ENST00000439453 ACTR3CQ9C0K3 210 aaPredicted RBP7.4□□□□□ -1.22
HPS4-206ENST00000439453 WWTR1Q9GZV5 400 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 MMACHCQ9Y4U1 282 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 EREGO14944 169 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 PHF1O43189 567 aaPredicted RBP7.4□□□□□ -1.22
HPS4-206ENST00000439453 H3F3AP84243 136 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 MFAP5Q13361 173 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 OR11L1Q8NGX0 322 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 ZPBPQ9BS86 351 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 FAAP24Q9BTP7 215 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 PLEKHF2Q9H8W4 249 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 CALHM2Q9HA72 323 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 PNRC2Q9NPJ4 139 aaKnown RBP7.4□□□□□ -1.22
HPS4-206ENST00000439453 SERINC1Q9NRX5 453 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 TMEM242Q9NWH2 141 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 DKKL1Q9UK85 242 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 LOC102723971A0A1B0GUV8 181 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 ZNF732B4DXR9 585 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 ONECUT2O95948 504 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 HBE1P02100 147 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 COX5BP10606 129 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 MDKP21741 143 aaPredicted RBP7.4□□□□□ -1.23
HPS4-206ENST00000439453 BATFQ16520 125 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 SLC35G3Q8N808 338 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 OR10G4Q8NGN3 311 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 PGAM5Q96HS1 289 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 LYZL4Q96KX0 146 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 SYT3Q9BQG1 590 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 CDH20Q9HBT6 801 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 SOHLH2Q9NX45 425 aa7.4□□□□□ -1.23
HPS4-206ENST00000439453 SEC16AO15027 2179 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 TRBV24-1A0A075B6N3 115 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 A0A1B0GU03 582 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 NKX2-6A6NCS4 301 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 C2orf72A6NCS6 295 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 CYB5R3P00387 301 aaPredicted RBP7.39□□□□□ -1.23
HPS4-206ENST00000439453 APLNRP35414 380 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 EFNA3P52797 238 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 RAB11AP62491 216 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 TLE4Q04727 773 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 FAM90A2PQ658T7 463 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 MEX3BQ6ZN04 569 aaKnown RBP7.39□□□□□ -1.23
HPS4-206ENST00000439453 VASH2Q86V25 355 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 NAXEQ8NCW5 288 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 OR5L2Q8NGL0 311 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 OR5C1Q8NGR4 320 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 OR4X1Q8NH49 305 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 PIGTQ969N2 578 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 GNPNAT1Q96EK6 184 aaPredicted RBP7.39□□□□□ -1.23
HPS4-206ENST00000439453 Q96M66 194 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 PRORYQ9H606 182 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 OR14J1Q9UGF5 321 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 RARRES3Q9UL19 164 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 IGKV3D-11A0A0A0MRZ8 115 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 LIPT2A6NK58 231 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 LIFP15018 202 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 G0S2P27469 103 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 DYNLT3P51808 116 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 RUNX1Q01196 453 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 RELQ04864 619 aaPredicted RBP7.39□□□□□ -1.23
HPS4-206ENST00000439453 TNFRSF9Q07011 255 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 PNRC1Q12796 327 aaPredicted RBP7.39□□□□□ -1.23
HPS4-206ENST00000439453 FOXF1Q12946 379 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 CMTM1Q8IZ96 169 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 TMEM252Q8N6L7 170 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 NOXO1Q8NFA2 376 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.39□□□□□ -1.23
HPS4-206ENST00000439453 ATG101Q9BSB4 218 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 GLRX2Q9NS18 164 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 PPP1R14DQ9NXH3 145 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 B3GAT1Q9P2W7 334 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 FAM221AA4D161 298 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 SCRG1O75711 98 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 IL18BPO95998 194 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 FAHP16930 419 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 NKX2-1P43699 371 aaPredicted RBP7.39□□□□□ -1.23
HPS4-206ENST00000439453 RNF4P78317 190 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 SLC10A1Q14973 349 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 CARD17Q5XLA6 110 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 PCSK4Q6UW60 755 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 TMEM123Q8N131 208 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 OR1P1Q8NH06 330 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 KCNE4Q8WWG9 221 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 ST8SIA1Q92185 356 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 DDIT4LQ96D03 193 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 CABLES2Q9BTV7 478 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 ANGPTL4Q9BY76 406 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 ALKBH4Q9NXW9 302 aa7.39□□□□□ -1.23
HPS4-206ENST00000439453 H3BML4 177 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms