RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 HIST3H3Q16695 136 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 THOC3Q96J01 351 aaKnown RBP11.68□□□□□ -0.54
PCNX3-202ENST00000439247 OXGR1Q96P68 337 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 CABLES2Q9BTV7 478 aa11.68□□□□□ -0.54
PCNX3-202ENST00000439247 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 A8MWP6 167 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 TCAPO15273 167 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 CA11O75493 328 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 SP9P0CG40 484 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 MSR1P21757 451 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 PTGDSP41222 190 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 COL10A1Q03692 680 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 RNASE11Q8TAA1 199 aaKnown RBP11.67□□□□□ -0.54
PCNX3-202ENST00000439247 TMEM222Q9H0R3 208 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 GAB2Q9UQC2 676 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 SOX15O60248 233 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 BPIFB3P59826 476 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 HLA-BQ31612 363 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF818PQ6ZRF7 136 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 STX12Q86Y82 276 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
PCNX3-202ENST00000439247 GJC3Q8NFK1 279 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 ANGPTL4Q9BY76 406 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF442Q9H7R0 627 aa11.67□□□□□ -0.54
PCNX3-202ENST00000439247 IGKV1D-13A0A0B4J2D9 117 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 A0A0U1RQV5 110 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 A0A1B0GU03 582 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 IGKV1-13P0DP09 117 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 GUCA1AP43080 201 aaPredicted RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 CLN3Q13286 438 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 TCEAL6Q6IPX3 200 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 C17orf82Q86X59 251 aaPredicted RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 IL22RA1Q8N6P7 574 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 NABP1Q96AH0 204 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 MRGPRX4Q96LA9 322 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 GPR87Q9BY21 358 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF286AQ9HBT8 521 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 RPRMQ9NS64 109 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 A0A0G2JRQ6 117 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 A0A1W2PR80 420 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF732B4DXR9 585 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 CLDN34H7C241 214 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 OR7C1O76099 320 aaPredicted RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 MMP7P09237 267 aaPredicted RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 NPBWR2P48146 333 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 ERVS71-1P61550 626 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF726P1Q15940 193 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 RTL6Q6ICC9 239 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 LRP11Q86VZ4 500 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 GAPTQ8N292 157 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 OR13D1Q8NGV5 346 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 SIGLEC12Q96PQ1 595 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 LRFN1Q9P244 771 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 LILRA5A6NI73 299 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 DTYMKP23919 212 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 PAX9P55771 341 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 RPS18P62269 152 aaKnown RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 MRPS34P82930 218 aaKnown RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 KCNMB1Q16558 191 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF468Q5VIY5 522 aaPredicted RBP11.66□□□□□ -0.54
PCNX3-202ENST00000439247 SLC25A24Q6NUK1 477 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 PLPPR1Q8TBJ4 325 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 OR14J1Q9UGF5 321 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 R4GN57 208 aa11.66□□□□□ -0.54
PCNX3-202ENST00000439247 A0A1B0GX78 115 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 G3V3Y1 287 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 DAZAP2Q15038 168 aaPredicted RBP11.65□□□□□ -0.54
PCNX3-202ENST00000439247 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 C2orf88Q9BSF0 95 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
PCNX3-202ENST00000439247 PLA2G3Q9NZ20 509 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 SCTP09683 121 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 GZMHP20718 246 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 CTSSP25774 331 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 TLE4Q04727 773 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 RTP5Q14D33 572 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 JOSD1Q15040 202 aaPredicted RBP11.65□□□□□ -0.54
PCNX3-202ENST00000439247 ZNF774Q6NX45 483 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 OSR2Q8N2R0 312 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.54
PCNX3-202ENST00000439247 BORCS8Q96FH0 119 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 ELOVL1Q9BW60 279 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 FGF21Q9NSA1 209 aa11.65□□□□□ -0.54
PCNX3-202ENST00000439247 CDS2O95674 445 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 IFNA10P01566 189 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 OR4A8P0C604 315 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 SPCS3P61009 180 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 TRIM61Q5EBN2 209 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 ANKRD37Q7Z713 158 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 CALHM1Q8IU99 346 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 CCDC71LQ8N9Z2 235 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 NEU1Q99519 415 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 AQP7P3A6NL99 342 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 CEBPZOSA8MTT3 80 aa11.64□□□□□ -0.55
PCNX3-202ENST00000439247 TIAF1O95411 115 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms