RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ZFP90Q8TF47 636 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 SECTM1Q8WVN6 248 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 ACOT12Q8WYK0 555 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 NABP1Q96AH0 204 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF689Q96CS4 500 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 RNF185Q96GF1 192 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 ACY3Q96HD9 319 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 CAPZA3Q96KX2 299 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 C9orf85Q96MD7 179 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR52E6Q96RD3 313 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 MND1Q9BWT6 205 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 GNB1LQ9BYB4 327 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 SLIRPQ9GZT3 109 aaKnown RBP2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 SH3BGRL3Q9H299 93 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 POMKQ9H5K3 350 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 MED29Q9NX70 200 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 XCL2Q9UBD3 114 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 MTFP1Q9UDX5 166 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 GLS2Q9UI32 602 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 RBM7Q9Y580 266 aaKnown RBP2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 INSL5Q9Y5Q6 135 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 PRSS21Q9Y6M0 314 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 V9GY05 133 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 TDRD15B5MCY1 1934 aaKnown RBP2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 CLIP1P30622 1438 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 A2MP01023 1474 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 ADAMTS12P58397 1594 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 TIAM1Q13009 1591 aa2.83□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGHV3OR16-12A0A075B7B8 117 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 TRAV8-2A0A0B4J237 113 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGHV3OR16-9A0A0B4J2B5 98 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 IQCMA0A1B0GVH7 501 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM172BPA6NC97 362 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF850A8MQ14 1090 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 D6RAR5 112 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 H0Y9J4 135 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 K7EQG2 157 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 NTN3O00634 580 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 XKRYO14609 159 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 HCRTR1O43613 425 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 PDCD6O75340 191 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 NXPH4O95158 308 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 C6orf47O95873 294 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 CCNE2O96020 404 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGHG1P01857 330 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 ATP5G1P05496 136 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 MPC1LP0DKB6 136 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 PRTN3P24158 256 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 CDK2P24941 298 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 AGTR1P30556 359 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 H2BFSP57053 126 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPS20P60866 119 aaKnown RBP2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF763Q0D2J5 394 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 Q0VFX4 171 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 GSG1Q2KHT4 349 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 MUC21Q5SSG8 566 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM201AQ5SY85 155 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 AKR1C8PQ5T2L2 129 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 AVPI1Q5T686 147 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 KDM4DQ6B0I6 523 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 C11orf71Q6IPW1 123 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 UGT2A3Q6UWM9 527 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 STRADAQ7RTN6 431 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 LRRTM1Q86UE6 522 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 OOSP2Q86WS3 158 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 TGIF2LYQ8IUE0 185 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 C9orf40Q8IXQ3 194 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 KLHDC8BQ8IXV7 354 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZCCHC24Q8N2G6 241 aaKnown RBP2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR13C4Q8NGS5 318 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 REEP6Q96HR9 211 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 CCDC115Q96NT0 180 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR4K3Q96R72 315 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 METTL26Q96S19 204 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF382Q96SR6 550 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 HSPB9Q9BQS6 159 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 PITPNM3Q9BZ71 974 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 TBL1XR1Q9BZK7 514 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 ULBP3Q9BZM4 244 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 SELENOIQ9C0D9 397 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 HMG20AQ9NP66 347 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 SIX2Q9NPC8 291 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 LYRM2Q9NU23 88 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 UQCC1Q9NVA1 299 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 OCIAD1Q9NX40 245 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 HDGFL3Q9Y3E1 203 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 RFNGQ9Y644 331 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 SMG6Q86US8 1419 aaKnown RBP2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 URB2Q14146 1524 aaKnown RBP2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 LRRIQ1Q96JM4 1722 aa2.82□□□□□ -1.96
HMGB1P12-201ENST00000438594 MEIKINA0A087WXM9 373 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 A0A096LPI6 279 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 TRAV39A0A0B4J263 110 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 A0A0B4J2A0 478 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 hADV38S2A0JD32 116 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM92AA1XBS5 289 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 TRAPPC13A5PLN9 417 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM183AA6NL82 134 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 E7EQ34 232 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 G3V2T6 193 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms