RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RARRES2Q99969 163 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 SPIN2BQ9BPZ2 258 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 EGLN1Q9GZT9 426 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 SLC35B3Q9H1N7 401 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 OR51B6Q9H340 312 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 PLA2G3Q9NZ20 509 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 ASPMQ8IZT6 3477 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 GPR179Q6PRD1 2367 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 LOC400499M0QZD8 3231 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 HS3ST1O14792 307 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 LILRA1O75019 489 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 SYNGR4O95473 234 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 TMEM50AO95807 157 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 FOLR2P14207 255 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 PTAFRP25105 342 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 PAX6P26367 422 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 RAB5BP61020 215 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 RND3P61587 244 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
CD44-209ENST00000433892 VAMP2P63027 116 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 CCL20P78556 96 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 ZNF266Q14584 549 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 C3AR1Q16581 482 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 KRBOX4Q5JUW0 171 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 ABHD17BQ5VST6 288 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 MKXQ8IYA7 352 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 SAXO1Q8IYX7 474 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 TMEM217Q8N7C4 229 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 OR5C1Q8NGR4 320 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 PBDC1Q9BVG4 233 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 PLEKHF2Q9H8W4 249 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 KCNJ16Q9NPI9 418 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 GLRX2Q9NS18 164 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 LYRM2Q9NU23 88 aaPredicted RBP10.1□□□□□ -0.79
CD44-209ENST00000433892 ATP23Q9Y6H3 246 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 URB1O60287 2271 aaKnown RBP10.1□□□□□ -0.79
CD44-209ENST00000433892 NCOR1O75376 2440 aa10.1□□□□□ -0.79
CD44-209ENST00000433892 KIR2DS1A0A191URI9 304 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 A0A1W2PPH5 198 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 A6NLC8 198 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 LINC01387J3KSC0 135 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 PITX3O75364 302 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 TUSC2O75896 110 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 JMJD7P0C870 316 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 ITGA3P26006 1051 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 KIR2DS4P43632 304 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 KIR2DS1Q14954 304 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 SRSF7Q16629 238 aaKnown RBP eCLIP10.09□□□□□ -0.79
CD44-209ENST00000433892 MPV17LQ2QL34 196 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 NMSQ5H8A3 153 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 LINC00696Q6ZRV3 163 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 C1orf210Q8IVY1 113 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 SUMF2Q8NBJ7 301 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 RDH5Q92781 318 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 HIST1H2AAQ96QV6 131 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
CD44-209ENST00000433892 B4GALT7Q9UBV7 327 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 CD300LBA8K4G0 201 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 C1orf196B1AJZ1 125 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 C9orf172C9J069 976 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 ARG1P05089 322 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 VDAC1P21796 283 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 UCP1P25874 307 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 DYNLT3P51808 116 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 IGFBP7Q16270 282 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 ODF3L1Q8IXM7 274 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 CMTM1Q8IZ96 169 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 C17orf78Q8N4C9 275 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 APH1AQ96BI3 265 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 POM121L2Q96KW2 1035 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 TAAR9Q96RI9 348 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 TTTY12Q9BZ98 90 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 SLC25A31Q9H0C2 315 aa10.09□□□□□ -0.79
CD44-209ENST00000433892 CHST1O43916 411 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 PGLYRP1O75594 196 aaPredicted RBP10.08□□□□□ -0.8
CD44-209ENST00000433892 MT-ND4LP03901 98 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 OR1C1Q15619 314 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 PCSK4Q6UW60 755 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 FAM24BQ8N5W8 94 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 OR5A2Q8NGI9 324 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 PLPPR1Q8TBJ4 325 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 FOXJ2Q9P0K8 574 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 KNTC1P50748 2209 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 hCG_1809904A0A1W2PP81 198 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 A0A1W2PR64 198 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 A0A1W2PRV1 198 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 PRSS44E7EML9 344 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 SS18L1O75177 396 aaPredicted RBP10.08□□□□□ -0.8
CD44-209ENST00000433892 SLC34A2O95436 690 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 COX5BP10606 129 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 EPHA1P21709 976 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 RUNX1Q01196 453 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 ID3Q02535 119 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 NUFIP2Q7Z417 695 aaKnown RBP10.08□□□□□ -0.8
CD44-209ENST00000433892 TMEM251Q8N6I4 163 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 IL22RA1Q8N6P7 574 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 LFNGQ8NES3 379 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 MRPL30Q8TCC3 161 aaKnown RBP10.08□□□□□ -0.8
CD44-209ENST00000433892 OR5P3Q8WZ94 311 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 STRADBQ9C0K7 418 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms