RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 ERVK11-1P61568 191 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 RPL7L1Q6DKI1 246 aaKnown RBP13.77□□□□□ -0.21
MBD4-203ENST00000429544 ZNF880Q6PDB4 577 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 LDLRAD3Q86YD5 345 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 OR52M1Q8NGK5 317 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 STARD4Q96DR4 205 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 RHOFQ9HBH0 211 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 OBP2BQ9NPH6 170 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 CCL28Q9NRJ3 127 aa13.77□□□□□ -0.21
MBD4-203ENST00000429544 UBE2J1Q9Y385 318 aaPredicted RBP13.77□□□□□ -0.21
MBD4-203ENST00000429544 TRAV39A0A0B4J263 110 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 KRBOX1C9JBD0 128 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 OR2H2O95918 312 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 PGA5P0DJD9 388 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 NBL1P41271 181 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 RND3P61587 244 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 TUSC1Q2TAM9 212 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 PCSK4Q6UW60 755 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 OR1S2Q8NGQ3 325 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 PLPPR1Q8TBJ4 325 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 NRIP2Q9BQI9 281 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 TMEM222Q9H0R3 208 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 FZR1Q9UM11 496 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 PCDHB10Q9UN67 800 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 ZSCAN5BA6NJL1 495 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 SLC33A1O00400 549 aaPredicted RBP13.76□□□□□ -0.21
MBD4-203ENST00000429544 FGF16O43320 207 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 SEM1Q6ZVN7 128 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 OR4A4PQ8NGN8 299 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 COQ3Q9NZJ6 369 aa13.76□□□□□ -0.21
MBD4-203ENST00000429544 PURGQ9UJV8 347 aaKnown RBP13.76□□□□□ -0.21
MBD4-203ENST00000429544 MLNRO43193 412 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 IGFL3Q6UXB1 125 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 SUN5Q8TC36 379 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 BOD1Q96IK1 185 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 KIRREL1Q96J84 757 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 SMIM3Q9BZL3 60 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 DNTTIP1Q9H147 329 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 TMEM100Q9NV29 134 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 FBXL17Q9UF56 701 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 AMDHD2Q9Y303 409 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 TMED3Q9Y3Q3 217 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 TMEM210A6NLX4 147 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 TAAR5O14804 337 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 KLK10O43240 276 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 CGAP01215 116 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 SRPXP78539 464 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 FAM209AQ5JX71 171 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 BHLHA15Q7RTS1 189 aaPredicted RBP13.75□□□□□ -0.21
MBD4-203ENST00000429544 STPG2Q8N412 459 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 OR10J5Q8NHC4 309 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 IL1F10Q8WWZ1 152 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 USB1Q9BQ65 265 aaKnown RBP13.75□□□□□ -0.21
MBD4-203ENST00000429544 ZNF71Q9NQZ8 489 aaPredicted RBP13.75□□□□□ -0.21
MBD4-203ENST00000429544 LUZP4Q9P127 313 aa13.75□□□□□ -0.21
MBD4-203ENST00000429544 NKX2-6A6NCS4 301 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 E5RGE8 158 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 MDH2P40926 338 aaKnown RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 CLEC9AQ6UXN8 241 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 ZNF695Q8IW36 515 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 OR8G5Q8NG78 346 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 CABLES2Q9BTV7 478 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 PLEKHA2Q9HB19 425 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 AKAP13Q12802 2813 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 MBD3L4A6NDZ8 208 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 MBD3L3A6NE82 208 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 MBD3L5A6NJ08 208 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 TNFSF12O43508 249 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 TIMM8AO60220 97 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 CEBPDP49716 269 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 SELENOHQ8IZQ5 122 aaKnown RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 MBD3L2Q8NHZ7 208 aaPredicted RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 RNF141Q8WVD5 230 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 TAF9BQ9HBM6 251 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 OR1A1Q9P1Q5 309 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 OR14J1Q9UGF5 321 aa13.74□□□□□ -0.21
MBD4-203ENST00000429544 RCL1Q9Y2P8 373 aaKnown RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 HEATR1Q9H583 2144 aaKnown RBP13.74□□□□□ -0.21
MBD4-203ENST00000429544 IGHV1-18A0A0C4DH31 117 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.73□□□□□ -0.21
MBD4-203ENST00000429544 K7EM74 188 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 SH2D1BO14796 132 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 TMEM33P57088 247 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 ZNF497Q6ZNH5 498 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 Q6ZS92 163 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 ZNF826PQ6ZT77 177 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 H1FOOQ8IZA3 346 aaPredicted RBP13.73□□□□□ -0.21
MBD4-203ENST00000429544 PRR18Q8N4B5 295 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 OR4D5Q8NGN0 318 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 UBALD1Q8TB05 177 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 ERGIC1Q969X5 290 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 BSCL2Q96G97 398 aaPredicted RBP13.73□□□□□ -0.21
MBD4-203ENST00000429544 TMEM56Q96MV1 263 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 OR2W1Q9Y3N9 320 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 TMEM56-RWDD3S4R434 201 aa13.73□□□□□ -0.21
MBD4-203ENST00000429544 DSPP15924 2871 aaKnown RBP13.73□□□□□ -0.21
MBD4-203ENST00000429544 IGHV2OR16-5A0A0B4J2B6 119 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms