RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 AMY2BP19961 511 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 CHATP28329 748 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 NPY4RP50391 375 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 SRPXP78539 464 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 FOXF2Q12947 444 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 C3orf36Q3SXR2 165 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 HEPN1Q6WQI6 88 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 OR10D3Q8NH80 312 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 GTF3AQ92664 365 aaKnown RBP8.17□□□□□ -1.1
NEDD1-203ENST00000429527 CMSS1Q9BQ75 279 aaKnown RBP8.17□□□□□ -1.1
NEDD1-203ENST00000429527 ADAT1Q9BUB4 502 aaKnown RBP8.17□□□□□ -1.1
NEDD1-203ENST00000429527 C14orf166Q9Y224 244 aaKnown RBP8.17□□□□□ -1.1
NEDD1-203ENST00000429527 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 MED6O75586 246 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 MBPP02686 304 aaPredicted RBP8.17□□□□□ -1.1
NEDD1-203ENST00000429527 FBP1P09467 338 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 OR8U8P0C7N1 319 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 COX5AP20674 150 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 GLP1RP43220 463 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM33P57088 247 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 UBE2V2Q15819 145 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 TMEM176BQ3YBM2 270 aaPredicted RBP8.17□□□□□ -1.1
NEDD1-203ENST00000429527 RAET1LQ5VY80 246 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 GGNBP1Q5YKI7 109 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 PLXDC2Q6UX71 529 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 LIAT1Q6ZQX7 453 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 LRRC75A-AS1Q8N1F1 130 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 OR1J1Q8NGS3 322 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 CASTOR1Q8WTX7 329 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 SPSB4Q96A44 273 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 SULT4A1Q9BR01 284 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 SH3BGRL2Q9UJC5 107 aa8.17□□□□□ -1.1
NEDD1-203ENST00000429527 MCTS1Q9ULC4 181 aaKnown RBP8.17□□□□□ -1.1
NEDD1-203ENST00000429527 FAM90A27PA6NNH2 459 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 VAMP5O95183 116 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 OR8U9P0C7N5 309 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 RAB5AP20339 215 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 FCGR2CP31995 323 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 ZNF474Q6S9Z5 364 aaPredicted RBP8.16□□□□□ -1.1
NEDD1-203ENST00000429527 FAM219AQ8IW50 185 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 CHST4Q8NCG5 386 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 OR8U1Q8NH10 309 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 FNDC9Q8TBE3 224 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 RBM24Q9BX46 236 aaKnown RBP8.16□□□□□ -1.1
NEDD1-203ENST00000429527 LIME1Q9H400 295 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 WFDC1Q9HC57 220 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 TREM1Q9NP99 234 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 SIRT7Q9NRC8 400 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 GSN-AS1Q9NRJ2 163 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 TRBV6-6A0A0A6YYG2 114 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 C1orf196B1AJZ1 125 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 PHOX2AO14813 284 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 GLRA1P23415 457 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 NFYBP25208 207 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 S100PP25815 95 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 CCKARP32238 428 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 HTR5AP47898 357 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 SLC35A1P78382 337 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 Q6ZRG5 221 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 SGPP2Q8IWX5 399 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 SEMA6DQ8NFY4 1073 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 OR2AJ1Q8NGZ0 328 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 ZNF845Q96IR2 970 aaPredicted RBP8.16□□□□□ -1.1
NEDD1-203ENST00000429527 NKX3-1Q99801 234 aaPredicted RBP8.16□□□□□ -1.1
NEDD1-203ENST00000429527 MED29Q9NX70 200 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 MED12LQ86YW9 2145 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 RELNP78509 3460 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 CACNA1CQ13936 2221 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 MPIG6BO95866 241 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 MSR1P21757 451 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 OR3A2P47893 321 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 SAXO1Q8IYX7 474 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 GJC3Q8NFK1 279 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 RCC1LQ96I51 464 aaKnown RBP8.16□□□□□ -1.1
NEDD1-203ENST00000429527 FOXN4Q96NZ1 517 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 SF3B5Q9BWJ5 86 aaKnown RBP8.16□□□□□ -1.1
NEDD1-203ENST00000429527 SLC35B3Q9H1N7 401 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 RGCCQ9H4X1 137 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 PLEKHF2Q9H8W4 249 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 NECAP2Q9NVZ3 263 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 MMP24Q9Y5R2 645 aa8.16□□□□□ -1.1
NEDD1-203ENST00000429527 PIGBOS1A0A0B4J2F0 54 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 C7orf77A4D0Y5 90 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 OR6C6A6NF89 314 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 SYNGR4O95473 234 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 MRPS34P82930 218 aaKnown RBP8.15□□□□□ -1.1
NEDD1-203ENST00000429527 ATXN7L3Q14CW9 347 aaPredicted RBP8.15□□□□□ -1.1
NEDD1-203ENST00000429527 OR8G1Q15617 311 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 FAM27BQ5VT28 67 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 BEND4Q6ZU67 534 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 MUCL1Q96DR8 90 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 CLCC1Q96S66 551 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 SRXN1Q9BYN0 137 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 BEX4Q9NWD9 120 aaPredicted RBP8.15□□□□□ -1.1
NEDD1-203ENST00000429527 EHFQ9NZC4 300 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 CRIM1Q9NZV1 1036 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 IGKV1D-8A0A087WSZ0 117 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 C13orf42A0A1B0GVH6 325 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 ZNF716A6NP11 495 aa8.15□□□□□ -1.1
NEDD1-203ENST00000429527 TGOLN2O43493 480 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms