RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 H3BUI4 141 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 CCDC159P0C7I6 412 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 MNDAP41218 407 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 GNG10P50151 68 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 ETV1P50549 477 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 ARHGDIBP52566 201 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 GBX2P52951 348 aaPredicted RBP12.29□□□□□ -0.44
SEC13-210ENST00000428626 PAX5Q02548 391 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 IL13RA2Q14627 380 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 OR2G6Q5TZ20 316 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 C5orf56Q8N8D9 126 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 OR4X2Q8NGF9 303 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 RPEQ96AT9 228 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
SEC13-210ENST00000428626 MRPL48Q96GC5 212 aaKnown RBP12.29□□□□□ -0.44
SEC13-210ENST00000428626 NOL4LQ96MY1 436 aaPredicted RBP12.29□□□□□ -0.44
SEC13-210ENST00000428626 MOB4Q9Y3A3 225 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 HSPE1-MOB4S4R3N1 261 aa12.29□□□□□ -0.44
SEC13-210ENST00000428626 HTR3BO95264 441 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 LALBAP00709 142 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 PF4P02776 101 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 FAM106CPP0CH98 169 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
SEC13-210ENST00000428626 HNF4GQ14541 408 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 KHDC1LQ5JSQ8 128 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 CCDC144NLQ6NUI1 221 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 LINC00482Q8N8I6 264 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 ZNF565Q8N9K5 539 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 SUMF2Q8NBJ7 301 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 OR13C5Q8NGS8 318 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 UBALD1Q8TB05 177 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 CYYR1Q96J86 154 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 Q96MT0 163 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 GPER1Q99527 375 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 C9orf16Q9BUW7 83 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 FAM192AQ9GZU8 254 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 FGF20Q9NP95 211 aaPredicted RBP12.28□□□□□ -0.44
SEC13-210ENST00000428626 LINC00527Q9UJ94 153 aa12.28□□□□□ -0.44
SEC13-210ENST00000428626 KMT2CQ8NEZ4 4911 aaKnown RBP12.28□□□□□ -0.44
SEC13-210ENST00000428626 NBEAL2Q6ZNJ1 2754 aa12.27□□□□□ -0.44
SEC13-210ENST00000428626 A0A1W2PP11 408 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 WI2-2373I1.2A0A1W2PRP0 233 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 MAGEA13PA6NCF6 341 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 LINC01548A6NM66 108 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 MPZL2O60487 215 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 RPSAP08865 295 aaKnown RBP12.27□□□□□ -0.45
SEC13-210ENST00000428626 C21orf33P30042 268 aaPredicted RBP12.27□□□□□ -0.45
SEC13-210ENST00000428626 SLC35A2P78381 396 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 RSU1Q15404 277 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 TMEM106AQ96A25 262 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 DPCDQ9BVM2 203 aaPredicted RBP12.27□□□□□ -0.45
SEC13-210ENST00000428626 BARHL1Q9BZE3 327 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 S100A14Q9HCY8 104 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
SEC13-210ENST00000428626 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
SEC13-210ENST00000428626 RPL36Q9Y3U8 105 aaKnown RBP12.27□□□□□ -0.45
SEC13-210ENST00000428626 PSMB11A5LHX3 300 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 M0QZK8 103 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 GEMIN2O14893 280 aaKnown RBP12.26□□□□□ -0.45
SEC13-210ENST00000428626 IGKV1D-33P01593 117 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 IGKV1-33P01594 117 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 HOXD3P31249 432 aaPredicted RBP12.26□□□□□ -0.45
SEC13-210ENST00000428626 RBM11P57052 281 aaKnown RBP12.26□□□□□ -0.45
SEC13-210ENST00000428626 MADCAM1Q13477 382 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 HES1Q14469 280 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
SEC13-210ENST00000428626 PQLC1Q8N2U9 271 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 GPR148Q8TDV2 347 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 RCC1LQ96I51 464 aaKnown RBP12.26□□□□□ -0.45
SEC13-210ENST00000428626 IFT22Q9H7X7 185 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 IL36GQ9NZH8 169 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 ING4Q9UNL4 249 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 ZNF281Q9Y2X9 895 aa12.26□□□□□ -0.45
SEC13-210ENST00000428626 AMMECR1Q9Y4X0 333 aaPredicted RBP12.26□□□□□ -0.45
SEC13-210ENST00000428626 IGHV3-72A0A0B4J1Y9 119 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 MAGEB3O15480 346 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 CLIC3O95833 236 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 TMEM11P17152 192 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 IGFBP3P17936 291 aaPredicted RBP12.25□□□□□ -0.45
SEC13-210ENST00000428626 REG1BP48304 166 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 KCNJ3P48549 501 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 RPL23AP62750 156 aaKnown RBP12.25□□□□□ -0.45
SEC13-210ENST00000428626 EGFEM1PQ0D2K5 195 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 EBI3Q14213 229 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 KLHL22Q53GT1 634 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 NHLRC3Q5JS37 347 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 DDI2Q5TDH0 399 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 RPL22L1Q6P5R6 122 aaKnown RBP12.25□□□□□ -0.45
SEC13-210ENST00000428626 HAVCR2Q8TDQ0 301 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 MYCBPQ99417 103 aaPredicted RBP12.25□□□□□ -0.45
SEC13-210ENST00000428626 PCDHB16Q9NRJ7 776 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 CLEC2DQ9UHP7 191 aa12.25□□□□□ -0.45
SEC13-210ENST00000428626 IGHV3-43A0A0B4J1X8 118 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 HSD17B6O14756 317 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 OGG1O15527 345 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 FGF16O43320 207 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 OR7C1O76099 320 aaPredicted RBP12.24□□□□□ -0.45
SEC13-210ENST00000428626 IGHV3-43DP0DP04 118 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms