RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 SH2D7A6NKC9 451 aaPredicted RBP13.78□□□□□ -0.2
DDR1-235ENST00000428153 IGHG2P01859 326 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 TMEM11P17152 192 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 KRTAP10-11P60412 298 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 SLC35B1P78383 322 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 EBI3Q14213 229 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 NHLRC3Q5JS37 347 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 ZFP1Q6P2D0 407 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 ETV3LQ6ZN32 361 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 LHFPL3Q86UP9 236 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 MRPL41Q8IXM3 137 aaKnown RBP13.78□□□□□ -0.2
DDR1-235ENST00000428153 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDR1-235ENST00000428153 MRPS18AQ9NVS2 196 aaKnown RBP13.78□□□□□ -0.2
DDR1-235ENST00000428153 ERVK13-1Q9NX77 482 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 ING3Q9NXR8 418 aa13.78□□□□□ -0.2
DDR1-235ENST00000428153 GZMHP20718 246 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 MYCNOSP40205 109 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 GBX2P52951 348 aaPredicted RBP13.77□□□□□ -0.21
DDR1-235ENST00000428153 ZNF816Q0VGE8 651 aaPredicted RBP13.77□□□□□ -0.21
DDR1-235ENST00000428153 KLHL22Q53GT1 634 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 UTF1Q5T230 341 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 OR2W3Q7Z3T1 314 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 DRAM1Q8N682 238 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 C8orf31Q8N9H6 132 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 OR52M1Q8NGK5 317 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 RHOXF1Q8NHV9 184 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 TSEN15Q8WW01 171 aaKnown RBP13.77□□□□□ -0.21
DDR1-235ENST00000428153 PDCD1LG2Q9BQ51 273 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 ISG20L2Q9H9L3 353 aaKnown RBP13.77□□□□□ -0.21
DDR1-235ENST00000428153 IL36GQ9NZH8 169 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 GMPPBQ9Y5P6 360 aa13.77□□□□□ -0.21
DDR1-235ENST00000428153 WI2-2373I1.2A0A1W2PRP0 233 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 GABRPO00591 440 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 HSPB6O14558 160 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 CD2P06729 351 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 GP2P55259 537 aaKnown RBP13.76□□□□□ -0.21
DDR1-235ENST00000428153 HES1Q14469 280 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 Q3ZCU0 254 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 LINC00596Q86U02 117 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 ZNF329Q86UD4 541 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 FOXRED2Q8IWF2 684 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 OR10X1Q8NGY0 326 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 MRGPRDQ8TDS7 321 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 TNFAIP8L1Q8WVP5 186 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 PYDC1Q8WXC3 89 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 GPER1Q99527 375 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 P2RX4Q99571 388 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 B9D2Q9BPU9 175 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 JAM3Q9BX67 310 aa13.76□□□□□ -0.21
DDR1-235ENST00000428153 SERPINE3A8MV23 424 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 CCRL2O00421 344 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 RSU1Q15404 277 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 ZSCAN26Q16670 478 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 ZIK1Q3SY52 487 aaPredicted RBP13.75□□□□□ -0.21
DDR1-235ENST00000428153 CCDC58Q4VC31 144 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 DEFB121Q5J5C9 76 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 SLC35E3Q7Z769 313 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 TGIF2LXQ8IUE1 241 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 IZUMO1Q8IYV9 350 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 LINC00311Q8N616 119 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 PLPPR1Q8TBJ4 325 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 GPR148Q8TDV2 347 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 NR1H4Q96RI1 486 aaPredicted RBP13.75□□□□□ -0.21
DDR1-235ENST00000428153 GON7Q9BXV9 100 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 FAM118AQ9NWS6 357 aa13.75□□□□□ -0.21
DDR1-235ENST00000428153 PAK1IP1Q9NWT1 392 aaPredicted RBP13.75□□□□□ -0.21
DDR1-235ENST00000428153 RPL36Q9Y3U8 105 aaKnown RBP13.75□□□□□ -0.21
DDR1-235ENST00000428153 E9PI62 339 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 H0YHG0 523 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 ZNF780AO75290 641 aaPredicted RBP13.74□□□□□ -0.21
DDR1-235ENST00000428153 IGKV1D-33P01593 117 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 IGKV1-33P01594 117 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 GAPDHP04406 335 aaKnown RBP13.74□□□□□ -0.21
DDR1-235ENST00000428153 SSTR5P35346 364 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 RPL22L1Q6P5R6 122 aaKnown RBP13.74□□□□□ -0.21
DDR1-235ENST00000428153 C10orf67Q8IYJ2 551 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 STPG2Q8N412 459 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 CBR4Q8N4T8 237 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 OR51A2Q8NGJ7 313 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 NOL4LQ96MY1 436 aaPredicted RBP13.74□□□□□ -0.21
DDR1-235ENST00000428153 DPCDQ9BVM2 203 aaPredicted RBP13.74□□□□□ -0.21
DDR1-235ENST00000428153 TMEM138Q9NPI0 162 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 LIN7CQ9NUP9 197 aaKnown RBP13.74□□□□□ -0.21
DDR1-235ENST00000428153 ST3GAL6Q9Y274 331 aa13.74□□□□□ -0.21
DDR1-235ENST00000428153 IGHV1-3A0A0C4DH29 117 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 TMEM30CPA0ZSE6 113 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 H3BNX3 289 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 AP4M1O00189 453 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 HSD17B6O14756 317 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 HOXD3P31249 432 aaPredicted RBP13.73□□□□□ -0.21
DDR1-235ENST00000428153 CD69Q07108 199 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 DIAPH2-AS1Q14236 149 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 MPV17LQ2QL34 196 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 PIGYQ3MUY2 71 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 LPCAT4Q643R3 524 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 TEX38Q6PEX7 206 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 UNQ9370/PRO34162Q6UXP9 181 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 C8orf86Q6ZUL3 223 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 SATL1Q86VE3 508 aa13.73□□□□□ -0.21
DDR1-235ENST00000428153 ZNF695Q8IW36 515 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms