RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PTTG2Q9NZH5 202 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF581Q9P0T4 197 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 RABL2AQ9UBK7 228 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 RPUSD1Q9UJJ7 312 aaKnown RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 KCNS2Q9ULS6 477 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 MGAT4AQ9UM21 535 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 RABL2BQ9UNT1 228 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 LINC00312Q9Y6C7 94 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 A3GALT2U3KPV4 340 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 PRRC2AP48634 2157 aaKnown RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 NAV2Q8IVL1 2488 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ASH1LQ9NR48 2969 aaKnown RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 IGHV2-70DA0A0C4DH43 119 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 FABP12A6NFH5 140 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 RAB27BO00194 218 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 MFNGO00587 321 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 SPINT2O43291 252 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 INHBBP09529 407 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 HNF1AP20823 631 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 GATA3P23771 443 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 PRSS3P35030 304 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 CBX5P45973 191 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 INPP1P49441 399 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 DVL1P1P54792 670 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 PLAC9Q5JTB6 97 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 HACD4Q5VWC8 232 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 RSBN1Q5VWQ0 802 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 SIGIRRQ6IA17 410 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 FAHD2BQ6P2I3 314 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF497Q6ZNH5 498 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 CIARTQ8N365 385 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 MRGPRDQ8TDS7 321 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 NUDCD2Q8WVJ2 157 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 FAHD2AQ96GK7 314 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 COQ2Q96H96 371 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 COX4I2Q96KJ9 171 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 SHARPINQ9H0F6 387 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF286AQ9HBT8 521 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 YAE1D1Q9NRH1 226 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 C19orf12Q9NSK7 152 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 HIF1ANQ9NWT6 349 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 UBE2J1Q9Y385 318 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 POLQO75417 2590 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 A0A096LNT2 108 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 TRAV39A0A0B4J263 110 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 MEIS3P1A6NDR6 274 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF729A6NN14 1252 aaPredicted RBP7□□□□□ -1.29
TRIM48-201ENST00000417545 C22orf46C9J442 243 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 HSPA12AO43301 675 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF728P0DKX0 622 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 ZFP36P26651 326 aaKnown RBP7□□□□□ -1.29
TRIM48-201ENST00000417545 TNFSF8P32971 234 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 TMEM50BP56557 158 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 ARPC4P59998 168 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 ARF6P62330 175 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF273Q14593 569 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 LTC4SQ16873 150 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 PYDC2Q56P42 97 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 OLFML2AQ68BL7 652 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 PYHIN1Q6K0P9 492 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 SPNS3Q6ZMD2 512 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 TEX29Q8N6K0 151 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 FCAMRQ8WWV6 532 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 ARL11Q969Q4 196 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 MSI2Q96DH6 328 aaKnown RBP7□□□□□ -1.29
TRIM48-201ENST00000417545 HDHD3Q9BSH5 251 aaPredicted RBP7□□□□□ -1.29
TRIM48-201ENST00000417545 PCGF1Q9BSM1 259 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 NXF2Q9GZY0 626 aaKnown RBP7□□□□□ -1.29
TRIM48-201ENST00000417545 AUNIPQ9H7T9 357 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 TAS2R3Q9NYW6 316 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 CALYQ9NYX4 217 aa7□□□□□ -1.29
TRIM48-201ENST00000417545 YLPM1P49750 1951 aaKnown RBP6.99□□□□□ -1.29
TRIM48-201ENST00000417545 KIR2DS1A0A191URI9 304 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 KIAA1324LA8MWY0 1029 aaPredicted RBP6.99□□□□□ -1.29
TRIM48-201ENST00000417545 J3QLI3 93 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 M0R1W7 72 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 TOX4O94842 621 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 MT-ND4P03905 459 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 FCGR3AP08637 254 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 CCL3L1P16619 93 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 GZMHP20718 246 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 DTYMKP23919 212 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 NFYBP25208 207 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 KIR2DS4P43632 304 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 ERVFRD-1P60508 538 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 ACTBP60709 375 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 ACTG1P63261 375 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 HLA-DRB3P79483 266 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 MRPS10P82664 201 aaKnown RBP6.99□□□□□ -1.29
TRIM48-201ENST00000417545 KIR2DS1Q14954 304 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF260Q3ZCT1 412 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 TMEM200BQ69YZ2 307 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 OR52W1Q6IF63 320 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 BIVMQ86UB2 503 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 KIR3DL3Q8N743 410 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 OR13A1Q8NGR1 328 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 C8orf46Q8TAG6 207 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 MRPL30Q8TCC3 161 aaKnown RBP6.99□□□□□ -1.29
TRIM48-201ENST00000417545 IL1F10Q8WWZ1 152 aa6.99□□□□□ -1.29
TRIM48-201ENST00000417545 S100ZQ8WXG8 99 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms