RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 OR13C5Q8NGS8 318 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 R3HDM4Q96D70 268 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 RBM14Q96PK6 669 aaKnown RBP20.27■□□□□ 0.84
VEGFA-208ENST00000417285 VCXQ9H320 206 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 LINC00574Q9H8X3 128 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 PCDHB16Q9NRJ7 776 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 KIF25Q9UIL4 384 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 ST3GAL6Q9Y274 331 aa20.27■□□□□ 0.84
VEGFA-208ENST00000417285 CASQ2O14958 399 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-208ENST00000417285 OR2F2O95006 317 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 CDRT1O95170 752 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 PAX5Q02548 391 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 TPTE2P1Q5T6R2 138 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 CENPVQ7Z7K6 275 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-208ENST00000417285 OSR2Q8N2R0 312 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 ZFP41Q8N8Y5 198 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 ZNF485Q8NCK3 441 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 OR5AU1Q8NGC0 362 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 OR9G1Q8NH87 305 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 MMP28Q9H239 520 aa20.26■□□□□ 0.83
VEGFA-208ENST00000417285 M0QZK8 103 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 ZNF780AO75290 641 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-208ENST00000417285 GNAO1P09471 354 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 IGFBP3P17936 291 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-208ENST00000417285 CD24P25063 80 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 NFYBP25208 207 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 CD83Q01151 205 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 NHLRC3Q5JS37 347 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 SLC16A12Q6ZSM3 486 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 REC114Q7Z4M0 266 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 LINC00596Q86U02 117 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 STX19Q8N4C7 294 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 ORAI1Q96D31 301 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 KIRREL1Q96J84 757 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 PGLYRP3Q96LB9 341 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 ZNF184Q99676 751 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-208ENST00000417285 SLC25A33Q9BSK2 321 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 CALYQ9NYX4 217 aa20.25■□□□□ 0.83
VEGFA-208ENST00000417285 AMMECR1Q9Y4X0 333 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-208ENST00000417285 ADARB2-AS1A8MUL3 147 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 GPX5O75715 221 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 FAM106CPP0CH98 169 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 RBM11P57052 281 aaKnown RBP20.24■□□□□ 0.83
VEGFA-208ENST00000417285 RBM39Q14498 530 aaKnown RBP20.24■□□□□ 0.83
VEGFA-208ENST00000417285 RSBN1Q5VWQ0 802 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-208ENST00000417285 THNSL2Q86YJ6 484 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 OR10A7Q8NGE5 316 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 OR13A1Q8NGR1 328 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 DPCDQ9BVM2 203 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-208ENST00000417285 IFT22Q9H7X7 185 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 PLCXD1Q9NUJ7 323 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 PSORS1C1Q9UIG5 152 aa20.24■□□□□ 0.83
VEGFA-208ENST00000417285 MYL12BO14950 172 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 OR7C1O76099 320 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-208ENST00000417285 IL1AP01583 271 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 FSTP19883 344 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 SERPINA2P20848 420 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 RPS11P62280 158 aaKnown RBP eCLIP20.23■□□□□ 0.83
VEGFA-208ENST00000417285 AHSA2Q719I0 299 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 SUMF2Q8NBJ7 301 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 PLPPR1Q8TBJ4 325 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 FBLIM1Q8WUP2 373 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 IDI2-AS1Q9NZ38 188 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 PLXNB1O43157 2135 aa20.23■□□□□ 0.83
VEGFA-208ENST00000417285 GPR176Q14439 515 aa20.22■□□□□ 0.83
VEGFA-208ENST00000417285 MPV17LQ2QL34 196 aa20.22■□□□□ 0.83
VEGFA-208ENST00000417285 TMEM95Q3KNT9 176 aa20.22■□□□□ 0.83
VEGFA-208ENST00000417285 ABCA11PQ4W5N1 156 aa20.22■□□□□ 0.83
VEGFA-208ENST00000417285 BPIFB6Q8NFQ5 453 aa20.22■□□□□ 0.83
VEGFA-208ENST00000417285 RPEQ96AT9 228 aa20.22■□□□□ 0.83
VEGFA-208ENST00000417285 PNMA8CA0A1B0GUJ8 204 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 NPIPB11E5RHQ5 1161 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 J3QR06 171 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 GEMIN2O14893 280 aaKnown RBP20.21■□□□□ 0.83
VEGFA-208ENST00000417285 GTF2F2P13984 249 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 GZMHP20718 246 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 WNT4P56705 351 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 SLC22A6Q4U2R8 563 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 LAIR2Q6ISS4 152 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 MRGPRDQ8TDS7 321 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 OR14A2Q96R54 314 aa20.21■□□□□ 0.83
VEGFA-208ENST00000417285 TRAV8-7A0A075B6U6 113 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 TRBV5-7A0A0A0MS05 114 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A18PA6NE21 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A16PA6NEW6 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A20PA6NIJ5 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A9PA6NNJ1 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A12PA8MX19 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A5PA8MXJ8 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 LPLP06858 475 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A15PP0C7V4 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A13PP0C7W8 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A14PP0C7W9 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FAM90A24PP0C7X0 464 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 MADCAM1Q13477 382 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 FBLN7Q53RD9 439 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 WFDC9Q8NEX5 89 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 THRSPQ92748 146 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 DCLRE1BQ9H816 532 aa20.2■□□□□ 0.82
VEGFA-208ENST00000417285 PSG11Q9UQ72 335 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms