RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 B3GALNT1O75752 331 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 DUS4LO95620 317 aaKnown RBP9□□□□□ -0.97
SMPD4P1-201ENST00000416717 HERV-K104P61576 105 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 ANKRD55Q3KP44 614 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 FAM201AQ5SY85 155 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 FAHD2BQ6P2I3 314 aaPredicted RBP9□□□□□ -0.97
SMPD4P1-201ENST00000416717 FIP1L1Q6UN15 594 aaKnown RBP9□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR11L1Q8NGX0 322 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 LINC01560Q8TB33 94 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 FAHD2AQ96GK7 314 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 MEGF10Q96KG7 1140 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 DHRS9Q9BPW9 319 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 USB1Q9BQ65 265 aaKnown RBP9□□□□□ -0.97
SMPD4P1-201ENST00000416717 TLNRD1Q9H1K6 362 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 CLEC4MQ9H2X3 399 aaPredicted RBP9□□□□□ -0.97
SMPD4P1-201ENST00000416717 RHOFQ9HBH0 211 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 HES4Q9HCC6 221 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 TRAPPC2LQ9UL33 140 aa9□□□□□ -0.97
SMPD4P1-201ENST00000416717 RAI1Q7Z5J4 1906 aaPredicted RBP8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 IGKV1-6A0A0C4DH72 117 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 C5orf51A6NDU8 294 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 TRDCB7Z8K6 153 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 ERVH48-1M5A8F1 160 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 ADAP1O75689 374 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 SFT2D2O95562 160 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR4A8P0C604 315 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 PPP3CBP16298 524 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 PIGPP57054 158 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 SORDQ00796 357 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 ABCA11PQ4W5N1 156 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 SPIN3Q5JUX0 258 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR5M8Q8NGP6 311 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 SECTM1Q8WVN6 248 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 NEUROG1Q92886 237 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 MRPL24Q96A35 216 aaKnown RBP8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 FAM122AQ96E09 287 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 KIRREL1Q96J84 757 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 GPHA2Q96T91 129 aa8.99□□□□□ -0.97
SMPD4P1-201ENST00000416717 FXYD6-FXYD2A0A087WZ82 144 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 KIR2DS1A0A191URI9 304 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 PPYP01298 95 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 TK1P04183 234 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 CD200P41217 278 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 KIR2DS4P43632 304 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 ASCL1P50553 236 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 ADORA2A-AS1P86434 159 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 DHODHQ02127 395 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 AESQ08117 197 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 MZT1Q08AG7 82 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 KIR2DS1Q14954 304 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 SMIM21Q3B7S5 101 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 SP6Q3SY56 376 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 LGALSLQ3ZCW2 172 aaPredicted RBP8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 FAM219AQ8IW50 185 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 TPRX1Q8N7U7 411 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 IFT22Q9H7X7 185 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 COQ3Q9NZJ6 369 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 DNAJB11Q9UBS4 358 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 GLS2Q9UI32 602 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 A0A1B0GWJ7 208 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 MPTX1A8MV57 137 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 IGHV1-46P01743 117 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 CTSDP07339 412 aaPredicted RBP8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 RPS2P15880 293 aaKnown RBP8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 CHRNB4P30926 498 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 SERPINF1P36955 418 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 GABRA2P47869 451 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 CCL8P80075 99 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 TNFAIP6P98066 277 aaPredicted RBP8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 COL10A1Q03692 680 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 SURF2Q15527 256 aaPredicted RBP8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 ADIPOQQ15848 244 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 ZNF497Q6ZNH5 498 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 TGIF2LYQ8IUE0 185 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 NUP37Q8NFH4 326 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 MOB3AQ96BX8 217 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 PLPPR2Q96GM1 343 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 CITED4Q96RK1 184 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 RIMS4Q9H426 269 aaPredicted RBP8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 SLA2Q9H6Q3 261 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 ARFGEF3Q5TH69 2177 aa8.98□□□□□ -0.97
SMPD4P1-201ENST00000416717 ANKHD1Q8IWZ3 2542 aaKnown RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 ARPC5O15511 151 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 HOXB5P09067 269 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 ACAA1P09110 424 aaPredicted RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 HLA-DRB3P79483 266 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 PCSK4Q6UW60 755 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 SGPP2Q8IWX5 399 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 LILRB2Q8N423 598 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 GCSAMQ8N6F7 178 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 METTL8Q9H825 291 aaKnown RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 OR1A1Q9P1Q5 309 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 LRBAP50851 2863 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 IGKV1D-13A0A0B4J2D9 117 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 HSD17B6O14756 317 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 DIRAS3O95661 229 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 IFNA2P01563 188 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 GLAP06280 429 aa8.97□□□□□ -0.97
SMPD4P1-201ENST00000416717 IGKV1-13P0DP09 117 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms