RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 VAMP2P63027 116 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 RUNX1Q01196 453 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 TDHQ8IZJ6 230 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 TMEM252Q8N6L7 170 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ZNF383Q8NA42 475 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 OR2V1Q8NHB1 315 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 IFI44Q8TCB0 444 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 GTF3AQ92664 365 aaKnown RBP8.42□□□□□ -1.06
CD44-206ENST00000415148 TMEM45BQ96B21 275 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 TOLLIPQ9H0E2 274 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 SLC7A10Q9NS82 523 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 DOK5Q9P104 306 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 LIPGQ9Y5X9 500 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ZNF407Q9C0G0 2248 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 KIR2DS1A0A191URI9 304 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 H3BQ15 152 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 HSD17B6O14756 317 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 CYTIPO60759 359 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 OR7C1O76099 320 aaPredicted RBP8.41□□□□□ -1.06
CD44-206ENST00000415148 NAPSAO96009 420 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 UCP1P25874 307 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 KIR2DS4P43632 304 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 RAB2AP61019 212 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 KIR2DS1Q14954 304 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 DAZAP2Q15038 168 aaPredicted RBP8.41□□□□□ -1.06
CD44-206ENST00000415148 MPV17LQ2QL34 196 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 HLA-BQ31612 363 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 CALHM1Q8IU99 346 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 EXTL1Q92935 676 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 RIMS4Q9H426 269 aaPredicted RBP8.41□□□□□ -1.06
CD44-206ENST00000415148 GLRX2Q9NS18 164 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 CXorf65A6NEN9 183 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 PROB1E7EW31 1015 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 CXCL13O43927 109 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 TUSC2O75896 110 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 SLC34A2O95436 690 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 TMEM50AO95807 157 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 HBE1P02100 147 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 HSPB1P04792 205 aaKnown RBP8.41□□□□□ -1.06
CD44-206ENST00000415148 SOD3P08294 240 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 JMJD7P0C870 316 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 SLC25A6P12236 298 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 EDN3P14138 238 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 FOLR3P41439 243 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 FGF12P61328 243 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 ELOBQ15370 118 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 OR8G1Q15617 311 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 NMSQ5H8A3 153 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 SLC25A26Q70HW3 274 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 OR5D13Q8NGL4 314 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 FGFBP3Q8TAT2 258 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 CPNE4Q96A23 557 aaPredicted RBP8.41□□□□□ -1.06
CD44-206ENST00000415148 RBMXL1Q96E39 390 aaKnown RBP8.41□□□□□ -1.06
CD44-206ENST00000415148 P4HTMQ9NXG6 502 aa8.41□□□□□ -1.06
CD44-206ENST00000415148 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 NTN3O00634 580 aaPredicted RBP8.4□□□□□ -1.06
CD44-206ENST00000415148 SRP19P09132 144 aaKnown RBP8.4□□□□□ -1.06
CD44-206ENST00000415148 NPBWR2P48146 333 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 TLE4Q04727 773 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 ZFP36L1Q07352 338 aaKnown RBP8.4□□□□□ -1.06
CD44-206ENST00000415148 IL24Q13007 206 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 CXorf66Q5JRM2 361 aaPredicted RBP8.4□□□□□ -1.06
CD44-206ENST00000415148 LINC00596Q86U02 117 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 YRDCQ86U90 279 aaKnown RBP8.4□□□□□ -1.06
CD44-206ENST00000415148 MKXQ8IYA7 352 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 CMTM1Q8IZ96 169 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 IL22RA1Q8N6P7 574 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 CYB561D1Q8N8Q1 229 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 OR10D3Q8NH80 312 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 ALKBH3Q96Q83 286 aaPredicted RBP8.4□□□□□ -1.06
CD44-206ENST00000415148 PFDN5Q99471 154 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 REPIN1Q9BWE0 567 aaKnown RBP8.4□□□□□ -1.06
CD44-206ENST00000415148 LINC00470Q9BZP3 86 aa8.4□□□□□ -1.06
CD44-206ENST00000415148 H0Y980 276 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2BKO60814 126 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 CST7O76096 145 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2BJP06899 126 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 WNT2P09544 360 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 COX5BP10606 129 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 MDKP21741 143 aaPredicted RBP8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2BOP23527 126 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2BBP33778 126 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2BDP58876 126 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2BCP62807 126 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 DLK1P80370 383 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 ICAM4Q14773 271 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 RNPS1Q15287 305 aaKnown RBP8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST2H2BEQ16778 126 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 ZNF674Q2M3X9 581 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 CEACAM21Q3KPI0 293 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 SPIN3Q5JUX0 258 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 ZNF506Q5JVG8 444 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.4□□□□□ -1.07
CD44-206ENST00000415148 ZNF468Q5VIY5 522 aaPredicted RBP8.4□□□□□ -1.07
CD44-206ENST00000415148 ZNF818PQ6ZRF7 136 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 C17orf78Q8N4C9 275 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 OR10G4Q8NGN3 311 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 OR10D4PQ8NGN7 298 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 OR5C1Q8NGR4 320 aa8.4□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2BHQ93079 126 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms