RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 GLAP06280 429 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 DLX6P56179 175 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 PAX5Q02548 391 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 SLC35E4Q6ICL7 350 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 CCDC107Q8WV48 283 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 TBX15Q96SF7 602 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 KPTNQ9Y664 436 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 TMEM30CPA0ZSE6 113 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 C11orf42Q8N5U0 333 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 SAMD12Q8N8I0 201 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 OR13A1Q8NGR1 328 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 KCTD12Q96CX2 325 aaKnown RBP25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 DMRTB1Q96MA1 342 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 ZMAT3Q9HA38 289 aaKnown RBP25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 SIRT7Q9NRC8 400 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 LPAR3Q9UBY5 353 aa25.12■■□□□ 1.61
CSNK1E-206ENST00000413574 FN1P02751 2386 aaKnown RBP25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 A0A075B6Q4 140 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 TRGV10A0A0A0MS01 117 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 MT-ND4P03905 459 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 ZNF728P0DKX0 622 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 ZNF182P17025 639 aaPredicted RBP25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 VMO1Q7Z5L0 202 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 KIR3DL3Q8N743 410 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 OR4K15Q8NH41 348 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 RAB3CQ96E17 227 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 ZNF714Q96N38 554 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 HSF4Q9ULV5 492 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 KCNK7Q9Y2U2 307 aa25.11■■□□□ 1.61
CSNK1E-206ENST00000413574 GNB3P16520 340 aa25.1■■□□□ 1.61
CSNK1E-206ENST00000413574 GLP1RP43220 463 aa25.1■■□□□ 1.61
CSNK1E-206ENST00000413574 FAM189A2Q15884 450 aa25.1■■□□□ 1.61
CSNK1E-206ENST00000413574 CMTM4Q8IZR5 234 aa25.1■■□□□ 1.61
CSNK1E-206ENST00000413574 TMEM160Q9NX00 188 aa25.1■■□□□ 1.61
CSNK1E-206ENST00000413574 AK3Q9UIJ7 227 aa25.1■■□□□ 1.61
CSNK1E-206ENST00000413574 A0A1W2PPH5 198 aa25.09■■□□□ 1.61
CSNK1E-206ENST00000413574 MRGPRDQ8TDS7 321 aa25.09■■□□□ 1.61
CSNK1E-206ENST00000413574 CORO2AQ92828 525 aa25.09■■□□□ 1.61
CSNK1E-206ENST00000413574 HDHD3Q9BSH5 251 aaPredicted RBP25.09■■□□□ 1.61
CSNK1E-206ENST00000413574 UBE2J1Q9Y385 318 aaPredicted RBP25.09■■□□□ 1.61
CSNK1E-206ENST00000413574 M0R1W7 72 aa25.08■■□□□ 1.61
CSNK1E-206ENST00000413574 FOXB2Q5VYV0 432 aa25.08■■□□□ 1.61
CSNK1E-206ENST00000413574 UPRTQ96BW1 309 aa25.08■■□□□ 1.61
CSNK1E-206ENST00000413574 OR6C3Q9NZP0 311 aa25.08■■□□□ 1.61
CSNK1E-206ENST00000413574 NIPBLQ6KC79 2804 aaeCLIP25.08■■□□□ 1.61
CSNK1E-206ENST00000413574 IGHV3OR16-10A0A075B7F0 116 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 SMIM31A0A1B0GVY4 71 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 SOX6P35712 828 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 KLF17Q5JT82 389 aaPredicted RBP25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 UBE2NLQ5JXB2 153 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 PDZD9Q8IXQ8 264 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 GAPTQ8N292 157 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 DTX3Q8N9I9 347 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 ACOT12Q8WYK0 555 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 NCOR1P1Q9H4R4 102 aa25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 ELF5Q9UKW6 265 aaPredicted RBP25.08■■□□□ 1.6
CSNK1E-206ENST00000413574 C17orf98A8MV24 154 aa25.07■■□□□ 1.6
CSNK1E-206ENST00000413574 ZNF782Q6ZMW2 699 aaPredicted RBP25.07■■□□□ 1.6
CSNK1E-206ENST00000413574 LURAP1LQ8IV03 231 aa25.07■■□□□ 1.6
CSNK1E-206ENST00000413574 ZNF565Q8N9K5 539 aa25.07■■□□□ 1.6
CSNK1E-206ENST00000413574 MRPL30Q8TCC3 161 aaKnown RBP25.07■■□□□ 1.6
CSNK1E-206ENST00000413574 AP3S1Q92572 193 aa25.07■■□□□ 1.6
CSNK1E-206ENST00000413574 CUBNO60494 3623 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 MFNGO00587 321 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 HPGDSO60760 199 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 MMP23AO75900 390 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 CGB3P0DN86 165 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 CGB7P0DN87 165 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 IGHV4-38-2P0DP08 117 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 HIST1H1DP16402 221 aaKnown RBP25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 OMGP23515 440 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 C17orf58Q2M2W7 97 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 C1orf122Q6ZSJ8 110 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 LHX4Q969G2 390 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 DCUN1D5Q9BTE7 237 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 ABCG5Q9H222 651 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 METTL8Q9H825 291 aaKnown RBP25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 CCDC59Q9P031 241 aaKnown RBP25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 TRAPPC2LQ9UL33 140 aa25.06■■□□□ 1.6
CSNK1E-206ENST00000413574 TRAV40A0A0B4J280 105 aa25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 ZNF701M0R085 212 aaPredicted RBP25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 CA11O75493 328 aa25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 EIF4EP06730 217 aaKnown RBP25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 RCC1P18754 421 aaPredicted RBP25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 KLRD1Q13241 179 aa25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 Q6ZPA2 131 aa25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 UBALD1Q8TB05 177 aa25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 BEX2Q9BXY8 128 aa25.05■■□□□ 1.6
CSNK1E-206ENST00000413574 SSTR5P35346 364 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 CDNFQ49AH0 187 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 PRAMEF5Q5TYX0 476 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 C5orf24Q7Z6I8 188 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 IZUMO1Q8IYV9 350 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 TNFRSF14Q92956 283 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 TAS2R3Q9NYW6 316 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 HNF1AP20823 631 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 PRTN3P24158 256 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 CDK2P24941 298 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 GDNFP39905 211 aa25.04■■□□□ 1.6
CSNK1E-206ENST00000413574 DYNC1I2Q13409 638 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms