RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 RND3P61587 244 aa20.8■□□□□ 0.92
VRK2-202ENST00000412104 ZNF146Q15072 292 aa20.8■□□□□ 0.92
VRK2-202ENST00000412104 SLC5A7Q9GZV3 580 aa20.8■□□□□ 0.92
VRK2-202ENST00000412104 FBXO9Q9UK97 447 aaPredicted RBP20.8■□□□□ 0.92
VRK2-202ENST00000412104 FZR1Q9UM11 496 aa20.8■□□□□ 0.92
VRK2-202ENST00000412104 SLC25A15Q9Y619 301 aa20.8■□□□□ 0.92
VRK2-202ENST00000412104 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.79■□□□□ 0.92
VRK2-202ENST00000412104 TEX46H3BTG2 121 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 GPR31O00270 319 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 TIMM8AO60220 97 aaPredicted RBP20.79■□□□□ 0.92
VRK2-202ENST00000412104 NAAAQ02083 359 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 SMCO1Q147U7 214 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 TBC1D26Q86UD7 250 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 GAPTQ8N292 157 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 PLPPR1Q8TBJ4 325 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 TREM2Q9NZC2 230 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 PCDHB10Q9UN67 800 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 LSM5Q9Y4Y9 91 aaKnown RBP20.79■□□□□ 0.92
VRK2-202ENST00000412104 PRR14LQ5THK1 2151 aa20.79■□□□□ 0.92
VRK2-202ENST00000412104 SCGB1D2O95969 90 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 EIF2S3LQ2VIR3 472 aaKnown RBP20.78■□□□□ 0.92
VRK2-202ENST00000412104 MEX3BQ6ZN04 569 aaKnown RBP20.78■□□□□ 0.92
VRK2-202ENST00000412104 CABLES2Q9BTV7 478 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 HKR1P10072 659 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 FABP6P51161 128 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 ZNF718Q3SXZ3 478 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 SHEQ5VZ18 495 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 SLC35G3Q8N808 338 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 FAM169BQ8N8A8 192 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 TMEM222Q9H0R3 208 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 CXXC4Q9H2H0 198 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 HES4Q9HCC6 221 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 WASF3Q9UPY6 502 aa20.78■□□□□ 0.92
VRK2-202ENST00000412104 SHOXO15266 292 aa20.77■□□□□ 0.92
VRK2-202ENST00000412104 ACAA1P09110 424 aaPredicted RBP20.77■□□□□ 0.92
VRK2-202ENST00000412104 SRPXP78539 464 aa20.77■□□□□ 0.92
VRK2-202ENST00000412104 MBNL2Q5VZF2 373 aaKnown RBP20.77■□□□□ 0.92
VRK2-202ENST00000412104 ZNF474Q6S9Z5 364 aaPredicted RBP20.77■□□□□ 0.92
VRK2-202ENST00000412104 ZNF497Q6ZNH5 498 aa20.77■□□□□ 0.92
VRK2-202ENST00000412104 Q6ZR03 302 aa20.77■□□□□ 0.92
VRK2-202ENST00000412104 MOB1BQ7L9L4 216 aa20.77■□□□□ 0.92
VRK2-202ENST00000412104 BAP18Q8IXM2 172 aa20.77■□□□□ 0.92
VRK2-202ENST00000412104 A0A1B0GW55 424 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 HSD17B6O14756 317 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 SH2D1BO14796 132 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 MBPP02686 304 aaPredicted RBP20.76■□□□□ 0.91
VRK2-202ENST00000412104 DUX4L2P0CJ85 424 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 DUX4L3P0CJ86 424 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 DUX4L4P0CJ87 422 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 DUX4L5P0CJ88 424 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 DUX4L6P0CJ89 424 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 DUX4L7P0CJ90 424 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 GCH1P30793 250 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 TMEM268Q5VZI3 342 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 C11orf53Q8IXP5 236 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 OR10J5Q8NHC4 309 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 KIRREL1Q96J84 757 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 BARX1Q9HBU1 254 aaPredicted RBP20.76■□□□□ 0.91
VRK2-202ENST00000412104 CCL28Q9NRJ3 127 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 DUX4Q9UBX2 424 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 TMED3Q9Y3Q3 217 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 SESN1Q9Y6P5 492 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 PROB1E7EW31 1015 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 MKRN2OSH3BPM6 223 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 TIMP3P35625 211 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 ZNF324BQ6AW86 544 aaPredicted RBP20.76■□□□□ 0.91
VRK2-202ENST00000412104 ZNF826PQ6ZT77 177 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 H1FOOQ8IZA3 346 aaPredicted RBP20.76■□□□□ 0.91
VRK2-202ENST00000412104 SLX1AQ9BQ83 275 aa20.76■□□□□ 0.91
VRK2-202ENST00000412104 TRAV39A0A0B4J263 110 aa20.75■□□□□ 0.91
VRK2-202ENST00000412104 K7EPK0 472 aa20.75■□□□□ 0.91
VRK2-202ENST00000412104 FIP1L1Q6UN15 594 aaKnown RBP20.75■□□□□ 0.91
VRK2-202ENST00000412104 HSD17B13Q7Z5P4 300 aaPredicted RBP20.75■□□□□ 0.91
VRK2-202ENST00000412104 FAM71E2Q8N5Q1 922 aa20.75■□□□□ 0.91
VRK2-202ENST00000412104 LRRC20Q8TCA0 184 aa20.75■□□□□ 0.91
VRK2-202ENST00000412104 USB1Q9BQ65 265 aaKnown RBP20.75■□□□□ 0.91
VRK2-202ENST00000412104 TLNRD1Q9H1K6 362 aa20.75■□□□□ 0.91
VRK2-202ENST00000412104 MSL2Q9HCI7 577 aa20.75■□□□□ 0.91
VRK2-202ENST00000412104 UBE2J1Q9Y385 318 aaPredicted RBP20.75■□□□□ 0.91
VRK2-202ENST00000412104 OR2W1Q9Y3N9 320 aa20.75■□□□□ 0.91
VRK2-202ENST00000412104 HAND1O96004 215 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 FGF2P09038 288 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 RPL12P30050 165 aaKnown RBP20.74■□□□□ 0.91
VRK2-202ENST00000412104 KRTCAP3Q53RY4 240 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 OR52M1Q8NGK5 317 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 S100PBPQ96BU1 408 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 TMEM56Q96MV1 263 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 GPHA2Q96T91 129 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 ZC4H2Q9NQZ6 224 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 OR14J1Q9UGF5 321 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 TMEM56-RWDD3S4R434 201 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 A8MXK9 166 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 NPIPB11E5RHQ5 1161 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 CEBPDP49716 269 aaPredicted RBP20.74■□□□□ 0.91
VRK2-202ENST00000412104 PRAMEF6Q5VXH4 476 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 FAM180AQ6UWF9 173 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 C1orf174Q8IYL3 243 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 BVESQ8NE79 360 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 FAM57AQ8TBR7 257 aa20.74■□□□□ 0.91
VRK2-202ENST00000412104 IL1F10Q8WWZ1 152 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms