RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ANKRD39Q53RE8 183 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 PRNTQ86SH4 94 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 GAPTQ8N292 157 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 WDTC1Q8N5D0 677 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 NFAM1Q8NET5 270 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 NPIPB3Q92617 1050 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 DDA1Q9BW61 102 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ASCL3Q9NQ33 180 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 PCOLCE2Q9UKZ9 415 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 BCORL1Q5H9F3 1711 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 HAX1O00165 279 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 GAGE7O76087 117 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 PEX11BO96011 259 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 GAGE12FP0CL80 117 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 GAGE12GP0CL81 117 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 GAGE12IP0CL82 117 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 PAX1P15863 534 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 SSTR5P35346 364 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 GFRA1P56159 465 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 RHOGP84095 191 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 DUSP2Q05923 314 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 DCAF10Q5QP82 559 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 SP5Q6BEB4 398 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 FAM159AQ6UWV7 190 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CYB561A3Q8NBI2 242 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 KLK6Q92876 244 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 FGF13Q92913 245 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 P2RX4Q99571 388 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 WFDC6Q9BQY6 131 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 WDR83Q9BRX9 315 aaKnown RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 HEXA-AS1Q9H8Q6 139 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 OTORQ9NRC9 128 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 GPR52Q9Y2T5 361 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ZFYVE16Q7Z3T8 1539 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 USP31Q70CQ4 1352 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 UBE2Q2LH0YL09 131 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 LEPROTO15243 131 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CEACAM4O75871 244 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CYB5R3P00387 301 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 HBDP02042 147 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 IRF3Q14653 427 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 NKG7Q16617 165 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 DEFB134Q4QY38 66 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 MORN1Q5T089 497 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 STPG2Q8N412 459 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM186Q96B77 213 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CSF3RQ99062 836 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 MEGF9Q9H1U4 602 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 MICAL3Q7RTP6 2002 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TRAV30A0A087WSZ9 112 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 A0A0J9YY10 115 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 C3orf80F5H4A9 247 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 SYNGR3O43761 229 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 FGF17O60258 216 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CXCL10P02778 98 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 UMODP07911 640 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 REG1BP48304 166 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 UBE2V2Q15819 145 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TNXAQ16473 311 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF880Q6PDB4 577 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM91Q6ZNR0 172 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CBLN2Q8IUK8 224 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 HBEGFQ99075 208 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 OPN3Q9H1Y3 402 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF446Q9NWS9 450 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM160Q9NX00 188 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF391Q9UJN7 358 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 EPDR1Q9UM22 224 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 VWDEQ8N2E2 1590 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TRAV5A0A0B4J249 113 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TEX48A0A1B0GUV7 120 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 MMP23AO75900 390 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 DDTP30046 118 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 NBL1P41271 181 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 SSPNQ14714 243 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TCEAL1Q15170 157 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 SUSD4Q5VX71 490 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ABHD14BQ96IU4 210 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 SYNMO15061 1565 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CEP152O94986 1710 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 J3KRW8 73 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 PXNP49023 591 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 RPS4XP62701 263 aaKnown RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ELAVL1Q15717 326 aaKnown RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 C2orf82Q6UX34 121 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 RTN4RL2Q86UN3 420 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 SMIM19Q96E16 107 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 MRGPRX1Q96LB2 322 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CLDND1Q9NY35 253 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TMED7-TICAM2A0A0A6YYA0 188 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 LOC107986453A0A1B0GWG9 222 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 IQCF6A8MYZ5 107 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 UCP2P55851 309 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 NPC2P61916 151 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 OR52I1Q8NGK6 324 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 MRGPRFQ96AM1 343 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TAAR3PQ9P1P4 343 aa4.05□□□□□ -1.76
PTPN13-202ENST00000411767 RNF17Q9BXT8 1623 aaKnown RBP4.05□□□□□ -1.76
PTPN13-202ENST00000411767 TRBV23-1A0A0A0MS06 115 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms