RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 CIB1Q99828 191 aa11.19□□□□□ -0.62
HLA-DQB2-229ENST00000411527 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZCCHC4Q9H5U6 513 aa11.19□□□□□ -0.62
HLA-DQB2-229ENST00000411527 LINC00574Q9H8X3 128 aa11.19□□□□□ -0.62
HLA-DQB2-229ENST00000411527 IGHV3-72A0A0B4J1Y9 119 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 TRAV24A0A0B4J272 114 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 DAPL1A0PJW8 107 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SEC14L6B5MCN3 397 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 NPIPB11E5RHQ5 1161 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 GAPDHP04406 335 aaKnown RBP11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 GPR12P47775 334 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 MTNR1BP49286 362 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 CCR9P51686 369 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZP1P60852 638 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 GPR50Q13585 617 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 EBI3Q14213 229 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 KISS1Q15726 138 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SLC16A12Q6ZSM3 486 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 TGIF2LXQ8IUE1 241 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 CNIH3Q8TBE1 160 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 GON7Q9BXV9 100 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 GABARAPL1Q9H0R8 117 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 RIBC2Q9H4K1 309 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SCOCQ9UIL1 159 aa11.18□□□□□ -0.62
HLA-DQB2-229ENST00000411527 TRAV39A0A0B4J263 110 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 IGHV1-3A0A0C4DH29 117 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 OR4C45A6NMZ5 311 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 J3QLW9 94 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 CCRL2O00421 344 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 HSD17B6O14756 317 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SLC16A6O15403 523 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZNF19P17023 458 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 FASP25445 335 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SSTR5P35346 364 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 REG1BP48304 166 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZNF816Q0VGE8 651 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 RSBN1Q5VWQ0 802 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ELP2Q6IA86 826 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 AMIGO2Q86SJ2 522 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 OR10A7Q8NGE5 316 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 PLPPR1Q8TBJ4 325 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ABCG5Q9H222 651 aa11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 LIN7CQ9NUP9 197 aaKnown RBP11.17□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SULT1B1O43704 296 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 MPZL2O60487 215 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ELANEP08246 267 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 FOXE3Q13461 319 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ALKBH1Q13686 389 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZSCAN26Q16670 478 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZNF691Q5VV52 312 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SERPINA12Q8IW75 414 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 Q8N6K4 173 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 Q8N9W7 124 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 OR5D14Q8NGL3 314 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 OR2T10Q8NGZ9 312 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SLC7A6OSQ96CW6 309 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 RNFT2Q96EX2 444 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 PELI1Q96FA3 418 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 FAM118AQ9NWS6 357 aa11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZNF256Q9Y2P7 627 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB2-229ENST00000411527 J3QRE1 110 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 ZNF260Q3ZCT1 412 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 LPCAT4Q643R3 524 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 IZUMO1Q8IYV9 350 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 PXT1Q8NFP0 134 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 C4orf36Q96KX1 117 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 GPER1Q99527 375 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 RASL11BQ9BPW5 248 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 GABARAPL3Q9BY60 117 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 AP4S1Q9Y587 144 aa11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 SIRT4Q9Y6E7 314 aaPredicted RBP11.15□□□□□ -0.62
HLA-DQB2-229ENST00000411527 LY86O95711 162 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 GZMHP20718 246 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CHATP28329 748 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 KCNJ3P48549 501 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 PAX5Q02548 391 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IL13RA2Q14627 380 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 PIGYQ3MUY2 71 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CASC10Q5T4H9 136 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SATL1Q86VE3 508 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 PARP16Q8N5Y8 322 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ACBD7Q8N6N7 88 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR10K1Q8NGX5 313 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TNFAIP8L1Q8WVP5 186 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TRUB1Q8WWH5 349 aaKnown RBP11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 S1PR3Q99500 378 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IMPAD1Q9NX62 359 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 RYR2Q92736 4967 aa11.14□□□□□ -0.63
HLA-DQB2-229ENST00000411527 HUWE1Q7Z6Z7 4374 aaKnown RBP11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 GABRPO00591 440 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 HTR3BO95264 441 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 MOSP00540 346 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IGHG4P01861 327 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 VDAC1P21796 283 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CD1BP29016 333 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms