RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 HOXA1P49639 335 aaPredicted RBP13.57□□□□□ -0.24
HOXD3-202ENST00000410016 KIR2DS1Q14954 304 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 ODF3L1Q8IXM7 274 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF565Q8N9K5 539 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 TMEM171Q8WVE6 324 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 CCL28Q9NRJ3 127 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 SMCO4Q9NRQ5 59 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 ADAM20O43506 726 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 TMEM50AO95807 157 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 CTXN2P0C2S0 81 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 WNT5AP41221 380 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 ID3Q02535 119 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 LINC00696Q6ZRV3 163 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 MRPL30Q8TCC3 161 aaKnown RBP13.56□□□□□ -0.24
HOXD3-202ENST00000410016 ESRP2Q9H6T0 727 aaKnown RBP13.56□□□□□ -0.24
HOXD3-202ENST00000410016 LYRM2Q9NU23 88 aaPredicted RBP13.56□□□□□ -0.24
HOXD3-202ENST00000410016 RFNGQ9Y644 331 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 DNAJC13O75165 2243 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 MED19A0JLT2 244 aaPredicted RBP13.56□□□□□ -0.24
HOXD3-202ENST00000410016 PRH1P02810 166 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 VDAC1P21796 283 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 ITGA3P26006 1051 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 MPLP40238 635 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 TMEM252Q8N6L7 170 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 SUMF2Q8NBJ7 301 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 PLPPR1Q8TBJ4 325 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF488Q96MN9 340 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 CLCC1Q96S66 551 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 SPIN2AQ99865 258 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 SPIN2BQ9BPZ2 258 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 ARRDC1-AS1Q9H2J1 176 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 PLEKHF2Q9H8W4 249 aa13.56□□□□□ -0.24
HOXD3-202ENST00000410016 TRAV24A0A0B4J272 114 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 PCP4L1A6NKN8 68 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 C21orf140B9A014 251 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 HSD17B6O14756 317 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 AKR1C3P42330 323 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 CLINT1Q14677 625 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 C3AR1Q16581 482 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 KDF1Q8NAX2 398 aaPredicted RBP13.55□□□□□ -0.24
HOXD3-202ENST00000410016 ABHD14BQ96IU4 210 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 EIF5A2Q9GZV4 153 aaKnown RBP13.55□□□□□ -0.24
HOXD3-202ENST00000410016 MAGT1Q9H0U3 335 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 KMT2EQ8IZD2 1858 aa13.55□□□□□ -0.24
HOXD3-202ENST00000410016 TRBV6-6A0A0A6YYG2 114 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 LNP1A1A4G5 178 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 C3orf80F5H4A9 247 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 SSSCA1O60232 199 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 PITX3O75364 302 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 PGLYRP1O75594 196 aaPredicted RBP13.54□□□□□ -0.24
HOXD3-202ENST00000410016 FOLR2P14207 255 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 SPINK2P20155 84 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 TMEM182Q6ZP80 229 aaPredicted RBP13.54□□□□□ -0.24
HOXD3-202ENST00000410016 NEK7Q8TDX7 302 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 HIST1H2AAQ96QV6 131 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 RIMS4Q9H426 269 aaPredicted RBP13.54□□□□□ -0.24
HOXD3-202ENST00000410016 PLK3Q9H4B4 646 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 OPA3Q9H6K4 179 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 FAM186AA6NE01 2351 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 KNTC1P50748 2209 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 IL18BPO95998 194 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 ATP6V0CP27449 155 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 PPP1CCP36873 323 aaKnown RBP13.54□□□□□ -0.24
HOXD3-202ENST00000410016 PLP2Q04941 152 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF266Q14584 549 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 RNPS1Q15287 305 aaKnown RBP13.54□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF880Q6PDB4 577 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 LINC00596Q86U02 117 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 C15orf54Q8N8G6 183 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 IP6K3Q96PC2 410 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 SPACA1Q9HBV2 294 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 BIN3Q9NQY0 253 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 GLRX2Q9NS18 164 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 ABI3Q9P2A4 366 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 PRSS50Q9UI38 385 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 MED13Q9UHV7 2174 aa13.54□□□□□ -0.24
HOXD3-202ENST00000410016 DOCK7Q96N67 2140 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 A0A1B0GW64 132 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 C7orf77A4D0Y5 90 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 HS3ST1O14792 307 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 OMGP23515 440 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 AWAT1Q58HT5 328 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF324BQ6AW86 544 aaPredicted RBP13.53□□□□□ -0.24
HOXD3-202ENST00000410016 OR5D13Q8NGL4 314 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 ABHD14AQ9BUJ0 271 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 RPS10P5Q9NQ39 176 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 MPC1Q9Y5U8 109 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 H0Y980 276 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 SLC34A2O95436 690 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 GNG3P63215 75 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 PLGLB1Q02325 96 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 HIKESHIQ53FT3 197 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 AKIRIN2Q53H80 203 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 SP5Q6BEB4 398 aaPredicted RBP13.53□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF573Q86YE8 665 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 CMTM1Q8IZ96 169 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
HOXD3-202ENST00000410016 FAM213BQ8TBF2 198 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms