RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 EIF3AQ14152 1382 aaKnown RBP3.39□□□□□ -1.87
LSM5-205ENST00000409952 IGKV3D-15A0A087WSY6 115 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 IGHV3-72A0A0B4J1Y9 119 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 IGKV6-21A0A0C4DH24 114 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 A0A1B0GVX0 72 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 NKX2-6A6NCS4 301 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 LGALS9O00182 355 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 ANGPTL7O43827 346 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 HBZP02008 142 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 IL6P05231 212 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 SCGB1C2P0DMR2 95 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 DAD1P61803 113 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 RSU1Q15404 277 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 SFXN4Q6P4A7 337 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 ZNF773Q6PK81 442 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 SHISA6Q6ZSJ9 500 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 VN1R4Q7Z5H5 301 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 NAA40Q86UY6 237 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 ZNF429Q86V71 674 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 ZNF584Q8IVC4 421 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 SLC25A29Q8N8R3 303 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 SCGB1C1Q8TD33 95 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 EEF1AKMT1Q8WVE0 214 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 TMA16Q96EY4 203 aaKnown RBP3.39□□□□□ -1.87
LSM5-205ENST00000409952 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 FAM210BQ96KR6 192 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 ZSCAN16Q9H4T2 348 aaPredicted RBP3.39□□□□□ -1.87
LSM5-205ENST00000409952 NANOGQ9H9S0 305 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 HMG20AQ9NP66 347 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 TMEM216Q9P0N5 145 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 YTHDF2Q9Y5A9 579 aaKnown RBP3.39□□□□□ -1.87
LSM5-205ENST00000409952 MYO15BQ96JP2 1530 aa3.39□□□□□ -1.87
LSM5-205ENST00000409952 LOC102724200A0A096LPH7 203 aaPredicted RBP3.38□□□□□ -1.87
LSM5-205ENST00000409952 IGHV3-64DA0A0J9YX35 117 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 C9JQL5 133 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 CIAO1O76071 339 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 CNIH1O95406 144 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 ATP5G1P05496 136 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 SOD3P08294 240 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 PSG2P11465 335 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 SLC6A1P30531 599 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 MP68P56378 58 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 SPCS3P61009 180 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 RAB5BP61020 215 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 HPCAP84074 193 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 EDDM3AQ14507 147 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 ELOCQ15369 112 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 FCN2Q15485 313 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 SLC9A3R2Q15599 337 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 ZNF239Q16600 458 aaKnown RBP3.38□□□□□ -1.87
LSM5-205ENST00000409952 FAM78AQ5JUQ0 283 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 HIST2H3PS2Q5TEC6 136 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 FAM222AQ5U5X8 452 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 OR6V1Q8N148 313 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 C15orf56Q8N910 161 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 MAPK1IP1LQ8NDC0 245 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 ZNF555Q8NEP9 628 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 OR10X1Q8NGY0 326 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 Q8WTZ3 238 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 IMMP1LQ96LU5 166 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 OLFM3Q96PB7 478 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 ZNF436Q9C0F3 470 aaPredicted RBP3.38□□□□□ -1.87
LSM5-205ENST00000409952 C12orf10Q9HB07 376 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 OR12D3Q9UGF7 316 aa3.38□□□□□ -1.87
LSM5-205ENST00000409952 ARHGAP23Q9P227 1491 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 WI2-2373I1.2A0A1W2PRP0 233 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 A6NDX4 124 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 H0YJW9 148 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 H0YJX3 145 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 TMEM250H0YL14 139 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 PSMD12O00232 456 aaPredicted RBP3.37□□□□□ -1.87
LSM5-205ENST00000409952 BPY2O14599 106 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 PLIN3O60664 434 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 KCNK2O95069 426 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 HAND1O96004 215 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 OR4A8P0C604 315 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 ZNF688P0C7X2 276 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 TLX1NBP0CAT3 122 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 ADRB3P13945 408 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 ZNF708P17019 499 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 ZBTB25P24278 435 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 GADD45AP24522 165 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 IMPA1P29218 277 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 DDTP30046 118 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 REG1BP48304 166 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 SARNPP82979 210 aaKnown RBP3.37□□□□□ -1.87
LSM5-205ENST00000409952 EMX1Q04741 257 aaPredicted RBP3.37□□□□□ -1.87
LSM5-205ENST00000409952 EBPQ15125 230 aaKnown RBP3.37□□□□□ -1.87
LSM5-205ENST00000409952 HENMT1Q5T8I9 393 aaKnown RBP3.37□□□□□ -1.87
LSM5-205ENST00000409952 N4BP2L1Q5TBK1 243 aaPredicted RBP3.37□□□□□ -1.87
LSM5-205ENST00000409952 IGFL2Q6UWQ7 119 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 NEGR1Q7Z3B1 354 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 TMED4Q7Z7H5 227 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 Q8N976 141 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 Q8N9W7 124 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 ZNF680Q8NEM1 530 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms