RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 RTN4IP1Q8WWV3 396 aaPredicted RBP6.36□□□□□ -1.39
CXCR4-202ENST00000409817 PHYHIPLQ96FC7 376 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 MISP3Q96FF7 219 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 OR51B6Q9H340 312 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 ZMAT4Q9H898 229 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 MED9Q9NWA0 146 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF581Q9P0T4 197 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 DUX4Q9UBX2 424 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 PURGQ9UJV8 347 aaKnown RBP6.36□□□□□ -1.39
CXCR4-202ENST00000409817 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 MUC6Q6W4X9 2439 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 URB1O60287 2271 aaKnown RBP6.36□□□□□ -1.39
CXCR4-202ENST00000409817 A0A1B0GWJ7 208 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 F8VVB4 439 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 F8VWA3 439 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 DEGS1O15121 323 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 PPYP01298 95 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 CECR9P0C854 216 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 PGA5P0DJD9 388 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 GCH1P30793 250 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 CEACAM8P31997 349 aaPredicted RBP6.36□□□□□ -1.39
CXCR4-202ENST00000409817 RND3P61587 244 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF154Q13106 437 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 IL15RAQ13261 267 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF880Q6PDB4 577 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 SUMF2Q8NBJ7 301 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 SCCPDHQ8NBX0 429 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 OR4A4PQ8NGN8 299 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 CYYR1Q96J86 154 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 NRIP2Q9BQI9 281 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 TLNRD1Q9H1K6 362 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 CXXC4Q9H2H0 198 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 SLC2A9Q9NRM0 540 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 MBD2Q9UBB5 411 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 DNAJB11Q9UBS4 358 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 GLS2Q9UI32 602 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 WASF3Q9UPY6 502 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 FAM215AQ9Y5M1 114 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 SLC25A15Q9Y619 301 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 GTF3C1Q12789 2109 aa6.36□□□□□ -1.39
CXCR4-202ENST00000409817 GVINP1Q7Z2Y8 2422 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 TRAV24A0A0B4J272 114 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 IGHV2OR16-5A0A0B4J2B6 119 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 A0A1W2PR80 420 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 RNF222A6NCQ9 220 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 NPIPB11E5RHQ5 1161 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 SH2D1BO14796 132 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 TUSC2O75896 110 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 CFDP00746 253 aaPredicted RBP6.35□□□□□ -1.39
CXCR4-202ENST00000409817 S100GP29377 79 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 NAAAQ02083 359 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 PDCD1Q15116 288 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 LRRC37A5PQ49AS3 106 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF324BQ6AW86 544 aaPredicted RBP6.35□□□□□ -1.39
CXCR4-202ENST00000409817 Q6P435 159 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 LGI3Q8N145 548 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 GAPTQ8N292 157 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 POC1AQ8NBT0 407 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 DYRK2Q92630 601 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 TOMM40LQ969M1 308 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 MUCL1Q96DR8 90 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 CCDC120Q96HB5 630 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 OPN3Q9H1Y3 402 aaPredicted RBP6.35□□□□□ -1.39
CXCR4-202ENST00000409817 PIGMQ9H3S5 423 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 LIME1Q9H400 295 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 RASL12Q9NYN1 266 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 RDH8Q9NYR8 311 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 TUBD1Q9UJT1 453 aa6.35□□□□□ -1.39
CXCR4-202ENST00000409817 FBXO9Q9UK97 447 aaPredicted RBP6.35□□□□□ -1.39
CXCR4-202ENST00000409817 INTS1Q8N201 2190 aaKnown RBP6.35□□□□□ -1.39
CXCR4-202ENST00000409817 IGHV1-18A0A0C4DH31 117 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 DUXBA0A1W2PPF3 345 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 GPR31O00270 319 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ZNHIT1O43257 154 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 TIMM8AO60220 97 aaPredicted RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ADAP1O75689 374 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 RHBDL1O75783 438 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 NXPH2O95156 264 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 RLN2P04090 185 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 RRASP10301 218 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF44P15621 663 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 AADACP22760 399 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 KCNJ3P48549 501 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 FXYD4P59646 89 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ERVS71-1P61550 626 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 HLA-DRB3P79483 266 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 TMEM187Q14656 261 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 SMCO1Q147U7 214 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 Q6ZPA2 131 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 WDR86Q86TI4 376 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ZNF565Q8N9K5 539 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 OR5T2Q8NGG2 359 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 LILRB1Q8NHL6 650 aaPredicted RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 LRRC20Q8TCA0 184 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 MRPL30Q8TCC3 161 aaKnown RBP6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ST8SIA2Q92186 375 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 DCUN1D4Q92564 292 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 AQP10Q96PS8 301 aa6.34□□□□□ -1.39
CXCR4-202ENST00000409817 ARPC5LQ9BPX5 153 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms