RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 RPS10-NUDT3A0A1W2PQS6 291 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 LEUTXA8MZ59 168 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 CLDN34H7C241 214 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 NGFP01138 241 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 ADH4P08319 380 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 GCH1P30793 250 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 CD80P33681 288 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 KRTAP10-3P60369 221 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 PLP2Q04941 152 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 PAX8Q06710 450 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 PNLIPRP3Q17RR3 467 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 ACTBL2Q562R1 376 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 CLVS2Q5SYC1 327 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 FAM27BQ5VT28 67 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 MBNL2Q5VZF2 373 aaKnown RBP10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 RFPL4BQ6ZWI9 263 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 OR8H3Q8N146 312 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 PP6455Q8WZ26 134 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 LYZL4Q96KX0 146 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 MS4A7Q9GZW8 240 aaPredicted RBP10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 IFT46Q9NQC8 304 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 MAB21L2Q9Y586 359 aa10.58□□□□□ -0.72
CHRNA1-205ENST00000409542 A0A0A6YYD4 124 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 C5orf49A4QMS7 147 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 F5H0A9 414 aaPredicted RBP10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 SSX5O60225 188 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 DHRS3O75911 302 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 FCER2P06734 321 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 CD55P08174 381 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 HCKP08631 526 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 HIST1H1DP16402 221 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 ZNF32P17041 273 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 ANOS1P23352 680 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 OR3A4PP47883 348 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 GMFBP60983 142 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 PSG4Q00888 419 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 PAX2Q02962 417 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 DPPA2Q7Z7J5 298 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 NAA40Q86UY6 237 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 SLC25A42Q86VD7 318 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 PNLDC1Q8NA58 520 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 OR56B1Q8NGI3 324 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 ANGPTL6Q8NI99 470 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 NUDCD2Q8WVJ2 157 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 SPTSSAQ969W0 71 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 URM1Q9BTM9 101 aaKnown RBP10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 TMEM59Q9BXS4 323 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 SELENOIQ9C0D9 397 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 TMEM106BQ9NUM4 274 aa10.57□□□□□ -0.72
CHRNA1-205ENST00000409542 IGKV1-9A0A0C4DH69 117 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 DHRS7CA6NNS2 312 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 A8MXK9 166 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 SIX6O95475 246 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 MPIG6BO95866 241 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 CST2P09228 141 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 GNB3P16520 340 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 HLA-GP17693 338 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 ZBTB25P24278 435 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 CBX5P45973 191 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 PPP1CBP62140 327 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 TNFAIP6P98066 277 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 RELBQ01201 579 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 GK2Q14410 553 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 RSPO1Q2MKA7 263 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 NRN1LQ496H8 165 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 SCGB2B2Q4G0G5 96 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 Q6ZR03 302 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 TMED4Q7Z7H5 227 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 OR4S1Q8NGB4 309 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 RAB3CQ96E17 227 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 CHST5Q9GZS9 411 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 EGLN1Q9GZT9 426 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 CST11Q9H112 138 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 TNFRSF19Q9NS68 423 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 VSIG4Q9Y279 399 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 MMP24Q9Y5R2 645 aa10.56□□□□□ -0.72
CHRNA1-205ENST00000409542 RFPL4AA6NLU0 287 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 RFPL4AL1F8VTS6 287 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 M0R135 149 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 MFNGO00587 321 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 CA11O75493 328 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 MTRF1O75570 445 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 B3GALNT1O75752 331 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 CFDP00746 253 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 PLATP00750 562 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 RPA2P15927 270 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 CD34P28906 385 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 S100A11P31949 105 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 UBE2MP61081 183 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 RAB14P61106 215 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 RPS27AP62979 156 aaKnown RBP10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 PSG7Q13046 419 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 DHRS2Q13268 280 aa10.55□□□□□ -0.72
CHRNA1-205ENST00000409542 TMEM155Q4W5P6 130 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms