RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 F12P00748 615 aaPredicted RBP10.71□□□□□ -0.69
ATG9A-203ENST00000409033 CEACAM6P40199 344 aa10.71□□□□□ -0.69
ATG9A-203ENST00000409033 TMEM33P57088 247 aa10.71□□□□□ -0.69
ATG9A-203ENST00000409033 FGF12P61328 243 aa10.71□□□□□ -0.69
ATG9A-203ENST00000409033 EIF5AP63241 154 aaKnown RBP10.71□□□□□ -0.69
ATG9A-203ENST00000409033 FAM76BQ5HYJ3 339 aa10.71□□□□□ -0.69
ATG9A-203ENST00000409033 KLF14Q8TD94 323 aaPredicted RBP10.71□□□□□ -0.69
ATG9A-203ENST00000409033 TM2D1Q9BX74 207 aa10.71□□□□□ -0.69
ATG9A-203ENST00000409033 KIF25Q9UIL4 384 aa10.71□□□□□ -0.69
ATG9A-203ENST00000409033 IGKV3D-15A0A087WSY6 115 aa10.71□□□□□ -0.7
ATG9A-203ENST00000409033 SH2D1BO14796 132 aa10.71□□□□□ -0.7
ATG9A-203ENST00000409033 KRASP01116 189 aa10.71□□□□□ -0.7
ATG9A-203ENST00000409033 ZNF154Q13106 437 aa10.71□□□□□ -0.7
ATG9A-203ENST00000409033 FAM201AQ5SY85 155 aa10.71□□□□□ -0.7
ATG9A-203ENST00000409033 TMEM182Q6ZP80 229 aaPredicted RBP10.71□□□□□ -0.7
ATG9A-203ENST00000409033 BCL2L2Q92843 193 aaPredicted RBP10.71□□□□□ -0.7
ATG9A-203ENST00000409033 TP53RKQ96S44 253 aa10.71□□□□□ -0.7
ATG9A-203ENST00000409033 PROB1E7EW31 1015 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 TSPAN15O95858 294 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 AKR1C3P42330 323 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 PSG7Q13046 419 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 TUSC1Q2TAM9 212 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 PRSS54Q6PEW0 395 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 MRPS24Q96EL2 167 aaKnown RBP10.7□□□□□ -0.7
ATG9A-203ENST00000409033 LINC00470Q9BZP3 86 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 SPACA1Q9HBV2 294 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 RASL12Q9NYN1 266 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 AKAP13Q12802 2813 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 RPL36A-HNRNPH2H7BZ11 118 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 CD80P33681 288 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 OR8G2PQ6IF36 304 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 Q6ZRG5 221 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 FOXL2NBQ6ZUU3 175 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 LRRC29Q8WV35 223 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 C20orf24Q9BUV8 137 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 SLC25A32Q9H2D1 315 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 MPC1Q9Y5U8 109 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 OR5B21A6NL26 309 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 MPPED1O15442 326 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 AKR1D1P51857 326 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 NHLH2Q02577 135 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 RGS7BPQ6MZT1 257 aaPredicted RBP10.7□□□□□ -0.7
ATG9A-203ENST00000409033 FAHD2BQ6P2I3 314 aaPredicted RBP10.7□□□□□ -0.7
ATG9A-203ENST00000409033 FAHD2AQ96GK7 314 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 DLL3Q9NYJ7 618 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 KCNMB2Q9Y691 235 aa10.7□□□□□ -0.7
ATG9A-203ENST00000409033 IGKV1D-13A0A0B4J2D9 117 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 J3QT63 122 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 GPR31O00270 319 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 OR2H2O95918 312 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 IGKV1-13P0DP09 117 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 PTAFRP25105 342 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 NHLRC3Q5JS37 347 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 ZNF818PQ6ZRF7 136 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 SLC38A6Q8IZM9 456 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 GLYATL2Q8WU03 294 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 RNF141Q8WVD5 230 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 TAAR6Q96RI8 345 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 LAMA5O15230 3695 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 K7EM74 188 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 SMPD2O60906 423 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 CECR9P0C854 216 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 DTYMKP23919 212 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 GFRALQ6UXV0 394 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 TCTEX1D2Q8WW35 142 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 TECTBQ96PL2 329 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 DCTN5Q9BTE1 182 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 ASCL3Q9NQ33 180 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 A0A1W2PPE3 182 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 DNM1P46Q6ZS02 220 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 BHLHA15Q7RTS1 189 aaPredicted RBP10.69□□□□□ -0.7
ATG9A-203ENST00000409033 LILRB2Q8N423 598 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 OR5P3Q8WZ94 311 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 LRRC46Q96FV0 321 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 FBLN5Q9UBX5 448 aa10.69□□□□□ -0.7
ATG9A-203ENST00000409033 MRPS18CQ9Y3D5 142 aaKnown RBP10.69□□□□□ -0.7
ATG9A-203ENST00000409033 YLPM1P49750 1951 aaKnown RBP10.69□□□□□ -0.7
ATG9A-203ENST00000409033 TNRC6AQ8NDV7 1962 aaKnown RBP10.68□□□□□ -0.7
ATG9A-203ENST00000409033 SMCO3A2RU48 225 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 FAM27E3Q08E93 113 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 TMEM267Q0VDI3 215 aaPredicted RBP10.68□□□□□ -0.7
ATG9A-203ENST00000409033 CXorf66Q5JRM2 361 aaPredicted RBP10.68□□□□□ -0.7
ATG9A-203ENST00000409033 FAM53AQ6NSI3 398 aaPredicted RBP10.68□□□□□ -0.7
ATG9A-203ENST00000409033 LIAT1Q6ZQX7 453 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 ZCCHC24Q8N2G6 241 aaKnown RBP10.68□□□□□ -0.7
ATG9A-203ENST00000409033 CNTNAP3BQ96NU0 1288 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 SPIN2AQ99865 258 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 SPIN2BQ9BPZ2 258 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 CNTNAP3Q9BZ76 1288 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 NUP50Q9UKX7 468 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 ARFGEF3Q5TH69 2177 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 COL5A1P20908 1838 aaPredicted RBP10.68□□□□□ -0.7
ATG9A-203ENST00000409033 PQLC2LA1A4F0 135 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 LINC00862A6NCI5 91 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 ATP6V1G2-DDX39BF2Z307 99 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 PRRG2O14669 202 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 SPANXN5Q5MJ07 72 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 STPG2Q8N412 459 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 RNF122Q9H9V4 155 aa10.68□□□□□ -0.7
ATG9A-203ENST00000409033 TRGV8A0A0C4DH27 118 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms