RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 ZNF146Q15072 292 aa14.08□□□□□ -0.16
PIKFYVE-204ENST00000407449 PCSK4Q6UW60 755 aa14.08□□□□□ -0.16
PIKFYVE-204ENST00000407449 FAM71E2Q8N5Q1 922 aa14.08□□□□□ -0.16
PIKFYVE-204ENST00000407449 FAM169BQ8N8A8 192 aa14.08□□□□□ -0.16
PIKFYVE-204ENST00000407449 IGKV1D-13A0A0B4J2D9 117 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 OR5H1A6NKK0 313 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 KRBOX1C9JBD0 128 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 SIRPB1O00241 398 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 SLC33A1O00400 549 aaPredicted RBP14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 FGF16O43320 207 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 CRYZL1O95825 349 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 SCGB1D2O95969 90 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 CRYABP02511 175 aaKnown RBP14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 IGKV1-13P0DP09 117 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 GLI4P10075 376 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 RPL12P30050 165 aaKnown RBP14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 EIF5AP63241 154 aaKnown RBP14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 TMEM268Q5VZI3 342 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 ZNF818PQ6ZRF7 136 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 GAPTQ8N292 157 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 SNIP1Q8TAD8 396 aaKnown RBP14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 SLX1AQ9BQ83 275 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 PLEKHA2Q9HB19 425 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 ZC4H2Q9NQZ6 224 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 NUP50Q9UKX7 468 aa14.07□□□□□ -0.16
PIKFYVE-204ENST00000407449 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 E5RGE8 158 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 NPIPB11E5RHQ5 1161 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 SH2D1BO14796 132 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 MLNRO43193 412 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 MBPP02686 304 aaPredicted RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 GRPP07492 148 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 FIP1L1Q6UN15 594 aaKnown RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 MEX3BQ6ZN04 569 aaKnown RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 ZNF497Q6ZNH5 498 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 C1orf174Q8IYL3 243 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 RBMXL3Q8N7X1 1067 aaKnown RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 SLC35G3Q8N808 338 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 OR10J5Q8NHC4 309 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 KIRREL1Q96J84 757 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 TMEM56Q96MV1 263 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 LINC00052Q96N35 136 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 CXXC4Q9H2H0 198 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 HES4Q9HCC6 221 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 TINAGQ9UJW2 476 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 NSG2Q9Y328 171 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 UBE2J1Q9Y385 318 aaPredicted RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 TMEM56-RWDD3S4R434 201 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 IGHV2OR16-5A0A0B4J2B6 119 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 TEX46H3BTG2 121 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 TIMM8AO60220 97 aaPredicted RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 RCC1P18754 421 aaPredicted RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 ZNF718Q3SXZ3 478 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 C1orf185Q5T7R7 199 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 ZNF324BQ6AW86 544 aaPredicted RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 H1FOOQ8IZA3 346 aaPredicted RBP14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 LRFN3Q9BTN0 628 aa14.06□□□□□ -0.16
PIKFYVE-204ENST00000407449 DUXBA0A1W2PPF3 345 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 CDS2O95674 445 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 MBNL2Q5VZF2 373 aaKnown RBP14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 CMTM1Q8IZ96 169 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 SPERTQ8NA61 448 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 OR4D5Q8NGN0 318 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 CCL28Q9NRJ3 127 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 OR2W1Q9Y3N9 320 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 FAM215AQ9Y5M1 114 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 SLC25A15Q9Y619 301 aa14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 INTS1Q8N201 2190 aaKnown RBP14.05□□□□□ -0.16
PIKFYVE-204ENST00000407449 HSD17B6O14756 317 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 S100GP29377 79 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 GCH1P30793 250 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 RNF141Q8WVD5 230 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 TMED6Q8WW62 240 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 SPIN2AQ99865 258 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 SPIN2BQ9BPZ2 258 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 USB1Q9BQ65 265 aaKnown RBP14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 TLNRD1Q9H1K6 362 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 NARFLQ9H6Q4 476 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 OR2S2Q9NQN1 319 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 H0Y980 276 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 ST8SIA3O43173 380 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 HAND1O96004 215 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 GAPDHP04406 335 aaKnown RBP14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 UCP1P25874 307 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 RPL7L1Q6DKI1 246 aaKnown RBP14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 ZNF695Q8IW36 515 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 SELENOHQ8IZQ5 122 aaKnown RBP14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 OR52M1Q8NGK5 317 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 FBXL17Q9UF56 701 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 WIPI2Q9Y4P8 454 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 POMT1Q9Y6A1 747 aa14.04□□□□□ -0.16
PIKFYVE-204ENST00000407449 GTF3C1Q12789 2109 aa14.03□□□□□ -0.16
PIKFYVE-204ENST00000407449 EIF5AL1Q6IS14 154 aaKnown RBP14.03□□□□□ -0.16
PIKFYVE-204ENST00000407449 C11orf53Q8IXP5 236 aa14.03□□□□□ -0.16
PIKFYVE-204ENST00000407449 GALNT11Q8NCW6 608 aa14.03□□□□□ -0.16
PIKFYVE-204ENST00000407449 IL22RA2Q969J5 263 aa14.03□□□□□ -0.16
PIKFYVE-204ENST00000407449 MBNL3Q9NUK0 354 aaKnown RBP14.03□□□□□ -0.16
PIKFYVE-204ENST00000407449 ASF1BQ9NVP2 202 aa14.03□□□□□ -0.16
PIKFYVE-204ENST00000407449 TAS2R3Q9NYW6 316 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms