RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
LIMK2-204ENST00000406516 BSNQ9UPA5 3926 aa13.05□□□□□ -0.32
LIMK2-204ENST00000406516 SNRNP70P08621 437 aaKnown RBP13.05□□□□□ -0.32
LIMK2-204ENST00000406516 GNMTQ14749 295 aa13.05□□□□□ -0.32
LIMK2-204ENST00000406516 SPINK14Q6IE38 97 aa13.05□□□□□ -0.32
LIMK2-204ENST00000406516 TMEM182Q6ZP80 229 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-204ENST00000406516 OR4D5Q8NGN0 318 aa13.05□□□□□ -0.32
LIMK2-204ENST00000406516 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
LIMK2-204ENST00000406516 SPACA1Q9HBV2 294 aa13.05□□□□□ -0.32
LIMK2-204ENST00000406516 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
LIMK2-204ENST00000406516 MRPL33O75394 65 aaKnown RBP13.04□□□□□ -0.32
LIMK2-204ENST00000406516 GNRHRP30968 328 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 HAAOP46952 286 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 GPM6AP51674 278 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 ARF1P84077 181 aaKnown RBP13.04□□□□□ -0.32
LIMK2-204ENST00000406516 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIMK2-204ENST00000406516 CLINT1Q14677 625 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 AWAT1Q58HT5 328 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 SPSB4Q96A44 273 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 TECTBQ96PL2 329 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 IL36RNQ9UBH0 155 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
LIMK2-204ENST00000406516 FREM1Q5H8C1 2179 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 FAM24AA6NFZ4 105 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 RPL36A-HNRNPH2H7BZ11 118 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 GFRA1P56159 465 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 POLR2GP62487 172 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIMK2-204ENST00000406516 IGFL2Q6UWQ7 119 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 DPPA2Q7Z7J5 298 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 TBC1D26Q86UD7 250 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 SIGLEC12Q96PQ1 595 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 C12orf57Q99622 126 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 USB1Q9BQ65 265 aaKnown RBP13.04□□□□□ -0.32
LIMK2-204ENST00000406516 SCRT1Q9BWW7 348 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 PRDM14Q9GZV8 571 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 FGF23Q9GZV9 251 aaPredicted RBP13.04□□□□□ -0.32
LIMK2-204ENST00000406516 TP53TG5Q9Y2B4 290 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
LIMK2-204ENST00000406516 M0R036 132 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 HLA-HP01893 362 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 OMGP23515 440 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 PRDX4Q13162 271 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 FAM213BQ8TBF2 198 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 BOD1Q96IK1 185 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 TMEM222Q9H0R3 208 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 FBXO7Q9Y3I1 522 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 C5orf49A4QMS7 147 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 TRDCB7Z8K6 153 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 SLC33A1O00400 549 aaPredicted RBP13.03□□□□□ -0.32
LIMK2-204ENST00000406516 SCTP09683 121 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 DAOP14920 347 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 FOXG1P55316 489 aaPredicted RBP13.03□□□□□ -0.32
LIMK2-204ENST00000406516 PCSK4Q6UW60 755 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 ZNF695Q8IW36 515 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 OR2C3Q8N628 320 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 MAGT1Q9H0U3 335 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 LRFN1Q9P244 771 aa13.03□□□□□ -0.32
LIMK2-204ENST00000406516 PQLC2LA1A4F0 135 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 SSSCA1O60232 199 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 CELA3AP09093 270 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 ZNF44P15621 663 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 PPP1CCP36873 323 aaKnown RBP13.02□□□□□ -0.32
LIMK2-204ENST00000406516 ARG2P78540 354 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 FOXO1Q12778 655 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 HMGN3Q15651 99 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 TSC22D1Q15714 1073 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 COMMD1Q8N668 190 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 ISOC2Q96AB3 205 aa13.02□□□□□ -0.32
LIMK2-204ENST00000406516 TNRC6AQ8NDV7 1962 aaKnown RBP13.02□□□□□ -0.33
LIMK2-204ENST00000406516 C7orf77A4D0Y5 90 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 NEURL1O76050 574 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 NXPH3O95157 252 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 TK1P04183 234 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 NKX2-1P43699 371 aaPredicted RBP13.02□□□□□ -0.33
LIMK2-204ENST00000406516 HABP2Q14520 560 aaPredicted RBP13.02□□□□□ -0.33
LIMK2-204ENST00000406516 ZNF818PQ6ZRF7 136 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 COLCA1Q6ZS62 124 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 GAPTQ8N292 157 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 C15orf54Q8N8G6 183 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 HIST1H2BAQ96A08 127 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 HES7Q9BYE0 225 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 CALHM2Q9HA72 323 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 ABI3Q9P2A4 366 aa13.02□□□□□ -0.33
LIMK2-204ENST00000406516 SPENQ96T58 3664 aaKnown RBP13.02□□□□□ -0.33
LIMK2-204ENST00000406516 IGSF23A1L1A6 192 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 CDS2O95674 445 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 UCP2P55851 309 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 SRPXP78539 464 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 LY6DQ14210 128 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 MRPL21Q7Z2W9 205 aaKnown RBP13.01□□□□□ -0.33
LIMK2-204ENST00000406516 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 REPIN1Q9BWE0 567 aaKnown RBP13.01□□□□□ -0.33
LIMK2-204ENST00000406516 Q9N2K0 584 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 COA4Q9NYJ1 87 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 STRAPQ9Y3F4 350 aaKnown RBP13.01□□□□□ -0.33
LIMK2-204ENST00000406516 IGKV1D-13A0A0B4J2D9 117 aa13.01□□□□□ -0.33
LIMK2-204ENST00000406516 ZNF503-AS2A6NEH8 195 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 681.7 ms