RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 DECR2Q9NUI1 292 aa12.34□□□□□ -0.43
SLC29A4-203ENST00000406453 TREM2Q9NZC2 230 aa12.34□□□□□ -0.43
SLC29A4-203ENST00000406453 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
SLC29A4-203ENST00000406453 RFPL4AA6NLU0 287 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 RFPL4AL1F8VTS6 287 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 CTSDP07339 412 aaPredicted RBP12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 EXOSC2Q13868 293 aaKnown RBP12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 TMUB2Q71RG4 321 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 WFDC8Q8IUA0 241 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 SECTM1Q8WVN6 248 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 SCGB3A2Q96PL1 93 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 CXXC4Q9H2H0 198 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 ZNF835Q9Y2P0 537 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 CRYM-AS1A6NIL9 109 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 OR5AC1P0C628 307 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 ZNF546Q86UE3 836 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 TPRX1Q8N7U7 411 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 TMEM171Q8WVE6 324 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 C1orf123Q9NWV4 160 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 GSKIPQ9P0R6 139 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 OR1A1Q9P1Q5 309 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 DCHS2Q6V1P9 2916 aa12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 DIDO1Q9BTC0 2240 aaKnown RBP12.33□□□□□ -0.44
SLC29A4-203ENST00000406453 SPRY3O43610 288 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 IFNA2P01563 188 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 HLA-GP17693 338 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 EGR1P18146 543 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 IL13RA2Q14627 380 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 SURF2Q15527 256 aaPredicted RBP12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 EIF2S3LQ2VIR3 472 aaKnown RBP12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 FOXRED2Q8IWF2 684 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 RTN4IP1Q8WWV3 396 aaPredicted RBP12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 MARVELD3Q96A59 401 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 MOB3AQ96BX8 217 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 MFFQ9GZY8 342 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 H0YIZ8 118 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 HAND1O96004 215 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 PMELP40967 661 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 GLP1RP43220 463 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 ABCA11PQ4W5N1 156 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 FAM201AQ5SY85 155 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 MRPL24Q96A35 216 aaKnown RBP12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 MRPL37Q9BZE1 423 aaKnown RBP12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 PARP12Q9H0J9 701 aaKnown RBP12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 MBD2Q9UBB5 411 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 ATP23Q9Y6H3 246 aa12.32□□□□□ -0.44
SLC29A4-203ENST00000406453 TNFSF12O43508 249 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 GNRHRP30968 328 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 HERV-K104P61576 105 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 C11orf87Q6NUJ2 197 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 PCSK4Q6UW60 755 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 GSG1LQ6UXU4 331 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 SGPP2Q8IWX5 399 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 POC1AQ8NBT0 407 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 IGHV3OR15-7A0A075B7D8 119 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 TRGV8A0A0C4DH27 118 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 HSD17B6O14756 317 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 THBDP07204 575 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 CD40P25942 277 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 S100A11P31949 105 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 RBM39Q14498 530 aaKnown RBP12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 ZNF146Q15072 292 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 ZNF818PQ6ZRF7 136 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 COMMD7Q86VX2 200 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 TGIF2LYQ8IUE0 185 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 ZCCHC24Q8N2G6 241 aaKnown RBP12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 GALNT11Q8NCW6 608 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 COQ8AQ8NI60 647 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 RASL12Q9NYN1 266 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 TMEM210A6NLX4 147 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 HMSDA8MTL9 139 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 AESQ08117 197 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 MRGPRGQ86SM5 289 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 LRRC29Q8WV35 223 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 TP53RKQ96S44 253 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 ESRP2Q9H6T0 727 aaKnown RBP12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 SPACA1Q9HBV2 294 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 HES4Q9HCC6 221 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 CCL28Q9NRJ3 127 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 COMMD9Q9P000 198 aa12.31□□□□□ -0.44
SLC29A4-203ENST00000406453 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 RNF222A6NCQ9 220 aa12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 C16orf97H3BN30 126 aa12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 HOXD4P09016 255 aaPredicted RBP12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 SPIN3Q5JUX0 258 aa12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 ACP7Q6ZNF0 438 aa12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 LYZL2Q7Z4W2 148 aa12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 LINC00596Q86U02 117 aa12.3□□□□□ -0.44
SLC29A4-203ENST00000406453 RRNAD1Q96FB5 475 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms