RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 PCSK4Q6UW60 755 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 ALKAL2Q6UX46 152 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 ZNF818PQ6ZRF7 136 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 LYZL2Q7Z4W2 148 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 TMEM171Q8WVE6 324 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 MOB3AQ96BX8 217 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 CXXC4Q9H2H0 198 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 CLEC4MQ9H2X3 399 aaPredicted RBP11.85□□□□□ -0.51
PRAME-205ENST00000405655 DECR2Q9NUI1 292 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 USF3Q68DE3 2245 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 RNF222A6NCQ9 220 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 TRDCB7Z8K6 153 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 GRNP28799 593 aaKnown RBP11.85□□□□□ -0.51
PRAME-205ENST00000405655 NKX6-1P78426 367 aaPredicted RBP11.85□□□□□ -0.51
PRAME-205ENST00000405655 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 SPIN3Q5JUX0 258 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 MBNL2Q5VZF2 373 aaKnown RBP11.85□□□□□ -0.51
PRAME-205ENST00000405655 C11orf87Q6NUJ2 197 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 GSG1LQ6UXU4 331 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 MEX3BQ6ZN04 569 aaKnown RBP11.85□□□□□ -0.51
PRAME-205ENST00000405655 LRRC29Q8WV35 223 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 NEUROG1Q92886 237 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 RBMXL1Q96E39 390 aaKnown RBP11.85□□□□□ -0.51
PRAME-205ENST00000405655 ZNF835Q9Y2P0 537 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 DYSFO75923 2080 aa11.85□□□□□ -0.51
PRAME-205ENST00000405655 ASH1LQ9NR48 2969 aaKnown RBP11.85□□□□□ -0.51
PRAME-205ENST00000405655 TRGV8A0A0C4DH27 118 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 A0A1B0GW55 424 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 MSGN1A6NI15 193 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 SPDEFO95238 335 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 CD40P25942 277 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 S100A11P31949 105 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 HERV-K104P61576 105 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 RAB32Q13637 225 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 LY6DQ14210 128 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4L9Q6RFH8 374 aaPredicted RBP11.84□□□□□ -0.51
PRAME-205ENST00000405655 CLEC9AQ6UXN8 241 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 GAPTQ8N292 157 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 OR2V2Q96R30 315 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 CITED4Q96RK1 184 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 RASL12Q9NYN1 266 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 ATP23Q9Y6H3 246 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 DPRXA6NFQ7 191 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
PRAME-205ENST00000405655 SELLP14151 372 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 HLA-GP17693 338 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 GLP1RP43220 463 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 SRSF4Q08170 494 aaKnown RBP11.84□□□□□ -0.51
PRAME-205ENST00000405655 IL13RA2Q14627 380 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 TMEM187Q14656 261 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 ACP7Q6ZNF0 438 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 SGPP2Q8IWX5 399 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 CD177Q8N6Q3 437 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 POC1AQ8NBT0 407 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 PLPPR2Q96GM1 343 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 TAAR3PQ9P1P4 343 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 POLDIP2Q9Y2S7 368 aa11.84□□□□□ -0.51
PRAME-205ENST00000405655 YLPM1P49750 1951 aaKnown RBP11.83□□□□□ -0.52
PRAME-205ENST00000405655 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 S100A10P60903 97 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 SMUG1Q53HV7 270 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 GGNBP1Q5YKI7 109 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 COQ8AQ8NI60 647 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 GLYATL2Q8WU03 294 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 ITLN1Q8WWA0 313 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 SCGB3A2Q96PL1 93 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 VRK1Q99986 396 aaPredicted RBP11.83□□□□□ -0.52
PRAME-205ENST00000405655 NAA60Q9H7X0 242 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 HES4Q9HCC6 221 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 COMMD9Q9P000 198 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 TRAPPC2LQ9UL33 140 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 HIVEP3Q5T1R4 2406 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 CACNA1AO00555 2505 aa11.83□□□□□ -0.52
PRAME-205ENST00000405655 ABCD4O14678 606 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 PHF1O43189 567 aaPredicted RBP11.82□□□□□ -0.52
PRAME-205ENST00000405655 NXPH3O95157 252 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 COL10A1Q03692 680 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 BSPH1Q075Z2 132 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 ZNF146Q15072 292 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 FAM74A1Q5RGS3 127 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 ADAM5Q6NVV9 412 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 ZNF497Q6ZNH5 498 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 GALNT11Q8NCW6 608 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 OR1L1Q8NH94 360 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 COQ2Q96H96 371 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 WFIKKN1Q96NZ8 548 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 RSRP1Q9BUV0 290 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 SLC5A7Q9GZV3 580 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 PLK3Q9H4B4 646 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 KIF25Q9UIL4 384 aa11.82□□□□□ -0.52
PRAME-205ENST00000405655 ERRFI1Q9UJM3 462 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms