RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 LIME1Q9H400 295 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 MYOZ1Q9NP98 299 aaPredicted RBP17.62■□□□□ 0.41
TPM1-208ENST00000404484 A0A0A6YYJ9 748 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 OR2AT4A6NND4 320 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 C3orf80F5H4A9 247 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.62■□□□□ 0.41
TPM1-208ENST00000404484 GOSR1O95249 250 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 CTXN2P0C2S0 81 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 OR5H8P0DN80 308 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 PSG2P11465 335 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 PRDX2P32119 198 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 GLP1RP43220 463 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 SWI5Q1ZZU3 235 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 MST1LQ2TV78 715 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 ZNF880Q6PDB4 577 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 ZNF554Q86TJ5 538 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 GHITMQ9H3K2 345 aa17.62■□□□□ 0.41
TPM1-208ENST00000404484 CEACAM18A8MTB9 384 aa17.61■□□□□ 0.41
TPM1-208ENST00000404484 TRDCB7Z8K6 153 aa17.61■□□□□ 0.41
TPM1-208ENST00000404484 SDCBPO00560 298 aaPredicted RBP17.61■□□□□ 0.41
TPM1-208ENST00000404484 ANXA7P20073 488 aaKnown RBP17.61■□□□□ 0.41
TPM1-208ENST00000404484 RRAS2P62070 204 aaPredicted RBP17.61■□□□□ 0.41
TPM1-208ENST00000404484 GLDNQ6ZMI3 551 aaPredicted RBP17.61■□□□□ 0.41
TPM1-208ENST00000404484 LHFPL1Q86WI0 220 aa17.61■□□□□ 0.41
TPM1-208ENST00000404484 OR51J1Q9H342 316 aa17.61■□□□□ 0.41
TPM1-208ENST00000404484 PLEKHF2Q9H8W4 249 aa17.61■□□□□ 0.41
TPM1-208ENST00000404484 TMEM30CPA0ZSE6 113 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 SNRPGP15A8MWD9 76 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 MUC1P15941 1255 aaPredicted RBP17.6■□□□□ 0.41
TPM1-208ENST00000404484 FPR2P25090 351 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 CEBPDP49716 269 aaPredicted RBP17.6■□□□□ 0.41
TPM1-208ENST00000404484 COL10A1Q03692 680 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 CBX3Q13185 183 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 SURF2Q15527 256 aaPredicted RBP17.6■□□□□ 0.41
TPM1-208ENST00000404484 ATPAF1Q5TC12 328 aaPredicted RBP17.6■□□□□ 0.41
TPM1-208ENST00000404484 BEX2Q9BXY8 128 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 MED28Q9H204 178 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 BEX1Q9HBH7 125 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 AKAP9Q99996 3911 aa17.6■□□□□ 0.41
TPM1-208ENST00000404484 FABP7O15540 132 aa17.59■□□□□ 0.41
TPM1-208ENST00000404484 CREBL2O60519 120 aaPredicted RBP17.59■□□□□ 0.41
TPM1-208ENST00000404484 PPOXP50336 477 aa17.59■□□□□ 0.41
TPM1-208ENST00000404484 TAS2R31P59538 309 aa17.59■□□□□ 0.41
TPM1-208ENST00000404484 SLC35E4Q6ICL7 350 aa17.59■□□□□ 0.41
TPM1-208ENST00000404484 Q6ZPA2 131 aa17.59■□□□□ 0.41
TPM1-208ENST00000404484 ASCC1Q8N9N2 400 aaKnown RBP17.59■□□□□ 0.41
TPM1-208ENST00000404484 PLPPR1Q8TBJ4 325 aa17.59■□□□□ 0.41
TPM1-208ENST00000404484 OTOGQ6ZRI0 2925 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 PSPNO60542 156 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 CYB5R3P00387 301 aaPredicted RBP17.58■□□□□ 0.41
TPM1-208ENST00000404484 GSTT2P0CG29 244 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 CD80P33681 288 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 HLA-DRB3P79483 266 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 PAX5Q02548 391 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 ATXN7L3Q14CW9 347 aaPredicted RBP17.58■□□□□ 0.41
TPM1-208ENST00000404484 CD276Q5ZPR3 534 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 FAHD2BQ6P2I3 314 aaPredicted RBP17.58■□□□□ 0.41
TPM1-208ENST00000404484 DHRS11Q6UWP2 260 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 SLC36A1Q7Z2H8 476 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 TMED4Q7Z7H5 227 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 OR4A4PQ8NGN8 299 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 FAHD2AQ96GK7 314 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 SNX22Q96L94 193 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 ZNF2Q9BSG1 426 aaPredicted RBP17.58■□□□□ 0.41
TPM1-208ENST00000404484 TRAPPC2LQ9UL33 140 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 VSIG4Q9Y279 399 aa17.58■□□□□ 0.41
TPM1-208ENST00000404484 IGKV1D-17A0A075B6S4 117 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 OOEPA6NGQ2 149 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 CCNKO75909 580 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 HNRNPCP07910 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
TPM1-208ENST00000404484 GABRA2P47869 451 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 OR3A1P47881 315 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 TEX36Q5VZQ5 186 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 ZCCHC24Q8N2G6 241 aaKnown RBP17.57■□□□□ 0.4
TPM1-208ENST00000404484 CD177Q8N6Q3 437 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 ANGPTL6Q8NI99 470 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 MARCH1Q8TCQ1 289 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 MRGPRFQ96AM1 343 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 CBLN4Q9NTU7 201 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 IGHV3OR15-7A0A075B7D8 119 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 SSNA1O43805 119 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 TK1P04183 234 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 NPY4RP50391 375 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 UBE2MP61081 183 aaKnown RBP17.57■□□□□ 0.4
TPM1-208ENST00000404484 C4orf46Q504U0 113 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 AADACL3Q5VUY0 350 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 ZNF626Q68DY1 528 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 C17orf107Q6ZR85 190 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 PEG10Q86TG7 708 aaKnown RBP17.57■□□□□ 0.4
TPM1-208ENST00000404484 SLC25A42Q86VD7 318 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 ZNF561Q8N587 486 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 OR5T2Q8NGG2 359 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 MBNL3Q9NUK0 354 aaKnown RBP17.57■□□□□ 0.4
TPM1-208ENST00000404484 ZNF222Q9UK12 451 aa17.57■□□□□ 0.4
TPM1-208ENST00000404484 DYSFO75923 2080 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 TRAV38-1A0A0B4J264 116 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 ZNF737O75373 536 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 DIRAS3O95661 229 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 VSIG10L2P0DP72 767 aa17.56■□□□□ 0.4
TPM1-208ENST00000404484 HOXA4Q00056 320 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms