RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SRSF7Q16629 238 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCDC47-202ENST00000403162 TBC1D26Q86UD7 250 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 SELENOHQ8IZQ5 122 aaKnown RBP17.04■□□□□ 0.32
CCDC47-202ENST00000403162 IL22RA1Q8N6P7 574 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 ZFP62Q8NB50 900 aaPredicted RBP17.04■□□□□ 0.32
CCDC47-202ENST00000403162 CLEC18CQ8NCF0 446 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 Q8NFD4 153 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 M1APQ8TC57 530 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 ABHD14AQ9BUJ0 271 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 OR2H1Q9GZK4 316 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 WNT5BQ9H1J7 359 aa17.04■□□□□ 0.32
CCDC47-202ENST00000403162 UBE2J1Q9Y385 318 aaPredicted RBP17.04■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A10PA6NDY2 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A18PA6NE21 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A16PA6NEW6 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A20PA6NIJ5 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A8PA6NJQ4 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A7PA6NKC0 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A22PA8MWA6 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A12PA8MX19 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A5PA8MXJ8 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A23PA8MXZ1 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 OR7C1O76099 320 aaPredicted RBP17.03■□□□□ 0.32
CCDC47-202ENST00000403162 IGHEP01854 428 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A15PP0C7V4 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A13PP0C7W8 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A14PP0C7W9 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM90A24PP0C7X0 464 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 MMP9P14780 707 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 FAM209BQ5JX69 171 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 GNPNAT1Q96EK6 184 aaPredicted RBP17.03■□□□□ 0.32
CCDC47-202ENST00000403162 GPR87Q9BY21 358 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 HIPK2Q9H2X6 1198 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 SLC7A10Q9NS82 523 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 RFNGQ9Y644 331 aa17.03■□□□□ 0.32
CCDC47-202ENST00000403162 ZNF716A6NP11 495 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 H3BQ15 152 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 RPL36A-HNRNPH2H7BZ11 118 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 SSSCA1O60232 199 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 IGHV2-70P01814 119 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 SRP19P09132 144 aaKnown RBP17.02■□□□□ 0.32
CCDC47-202ENST00000403162 PATE4P0C8F1 98 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 B3GALT5-AS1P59052 145 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 BAXQ07812 192 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 PIGCQ92535 297 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 GLRX2Q9NS18 164 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 P4HTMQ9NXG6 502 aa17.02■□□□□ 0.32
CCDC47-202ENST00000403162 HSD17B6O14756 317 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 PCBD1P61457 104 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 VAMP2P63027 116 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 SSPNQ14714 243 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 CALHM1Q8IU99 346 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 ZNF611Q8N823 705 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 OR5C1Q8NGR4 320 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 SLAMF9Q96A28 289 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 RAB39BQ96DA2 213 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 ALKBH3Q96Q83 286 aaPredicted RBP17.02■□□□□ 0.31
CCDC47-202ENST00000403162 FOXB1Q99853 325 aa17.02■□□□□ 0.31
CCDC47-202ENST00000403162 TRAV20A0A0B4J274 112 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 HOXA5P20719 270 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 OMGP23515 440 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 NMSQ5H8A3 153 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 IGF2-ASQ6U949 168 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 ODF3L1Q8IXM7 274 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 SPSB4Q96A44 273 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 PARPBPQ9NWS1 579 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 AHCTF1Q8WYP5 2266 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 ADAM20O43506 726 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 HSPB1P04792 205 aaKnown RBP17.01■□□□□ 0.31
CCDC47-202ENST00000403162 ITGA3P26006 1051 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 ID3Q02535 119 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 FOXO1Q12778 655 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 FOXC1Q12948 553 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 CXorf66Q5JRM2 361 aaPredicted RBP17.01■□□□□ 0.31
CCDC47-202ENST00000403162 ZNF506Q5JVG8 444 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 ACER2Q5QJU3 275 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 AAED1Q7RTV5 226 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 PPP1R32Q7Z5V6 425 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 EXTL1Q92935 676 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 SIGLEC12Q96PQ1 595 aa17.01■□□□□ 0.31
CCDC47-202ENST00000403162 TK1P04183 234 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 RPS10P46783 165 aaKnown RBP17■□□□□ 0.31
CCDC47-202ENST00000403162 NPBWR2P48146 333 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 DYNLT3P51808 116 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 KIAA0141Q14154 515 aaPredicted RBP17■□□□□ 0.31
CCDC47-202ENST00000403162 ICAM4Q14773 271 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 NCMAPQ5T1S8 102 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 RIPPLY2Q5TAB7 128 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 ZNF818PQ6ZRF7 136 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 SLC25A26Q70HW3 274 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 FGFBP3Q8TAT2 258 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 KCNE4Q8WWG9 221 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 EDARADDQ8WWZ3 215 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 Q9N2K0 584 aa17■□□□□ 0.31
CCDC47-202ENST00000403162 SCAF4O95104 1147 aaKnown RBP16.99■□□□□ 0.31
CCDC47-202ENST00000403162 EDN3P14138 238 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 UCP1P25874 307 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 SRD5A2P31213 254 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 TAGLN2P37802 199 aaKnown RBP16.99■□□□□ 0.31
CCDC47-202ENST00000403162 CARD18P57730 90 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms