RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 VSTM2AQ8TAG5 236 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 ADIPOR1Q96A54 375 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 SCN4AP35499 1836 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 SVILO95425 2214 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 IGHV3OR15-7A0A075B7D8 119 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 PHOX2AO14813 284 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 DTD1Q8TEA8 209 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 GPX7Q96SL4 187 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-204ENST00000400337 TMPRSS5Q9H3S3 457 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 PPP1R3EQ9H7J1 279 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 SLC7A10Q9NS82 523 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 ZNFX1Q9P2E3 1918 aaKnown RBP15.87■□□□□ 0.13
COL18A1-204ENST00000400337 C16orf97H3BN30 126 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 ZNHIT1O43257 154 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 AESQ08117 197 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 HOGA1Q86XE5 327 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 ATP5SQ99766 215 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 SH2D2AQ9NP31 389 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 PILRBQ9UKJ0 227 aa15.87■□□□□ 0.13
COL18A1-204ENST00000400337 K7ESF4 209 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 CD1AP06126 327 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 GNG4P50150 75 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 TOLLIPQ9H0E2 274 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 ZNF665Q9H7R5 613 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 NKX2-6A6NCS4 301 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 GALR1P47211 349 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 SPNS3Q6ZMD2 512 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 FAM24BQ8N5W8 94 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 OR1L4Q8NGR5 311 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 THYN1Q9P016 225 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 HSBP1O75506 76 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 GOSR1O95249 250 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 PGA4P0DJD7 388 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 VSIG4Q9Y279 399 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 HS3ST3B1Q9Y662 390 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 OR8B3Q8NGG8 313 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 OR8B2Q96RD0 313 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 RNF122Q9H9V4 155 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 DSPPQ9NZW4 1301 aa15.86■□□□□ 0.13
COL18A1-204ENST00000400337 NKX2-8O15522 239 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 TPPP2P59282 170 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 RTP5Q14D33 572 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 MOGAT2Q3SYC2 334 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 TRIOBPQ9H2D6 2365 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 TMEM210A6NLX4 147 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 CDRT15L2A8MXV6 281 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 RGS13O14921 159 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 FTH1P19P0C7X4 201 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 RBM11P57052 281 aaKnown RBP15.85■□□□□ 0.13
COL18A1-204ENST00000400337 DNASE2BQ8WZ79 361 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 PTX4Q96A99 478 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 A0A0U1RQV5 110 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 HLA-GP17693 338 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 LGALSLQ3ZCW2 172 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-204ENST00000400337 KCNK17Q96T54 332 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 CA10Q9NS85 328 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 CKAP5Q14008 2032 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 IGF2P01344 180 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 LYZP61626 148 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 SSX7Q7RTT5 188 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 OR4A4PQ8NGN8 299 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 SCMH1Q96GD3 660 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 SCARF2Q96GP6 870 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-204ENST00000400337 A0A1W2PQM1 296 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 RBFOX3A6NFN3 312 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 CA11O75493 328 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 GYPAP02724 150 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 FABP4P15090 132 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 FHL5Q5TD97 284 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 SLC23A3Q6PIS1 610 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 LIPGQ9Y5X9 500 aa15.85■□□□□ 0.13
COL18A1-204ENST00000400337 B3GALNT1O75752 331 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 OR4A8P0C604 315 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 SIGIRRQ6IA17 410 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 MS4A5Q9H3V2 200 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 CASP8AP2Q9UKL3 1982 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 A0A1W2PP11 408 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 G6PCP35575 357 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 DHRS7BQ6IAN0 325 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-204ENST00000400337 CTHRC1Q96CG8 243 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 WDR61Q9GZS3 305 aaKnown RBP15.84■□□□□ 0.13
COL18A1-204ENST00000400337 LPAR3Q9UBY5 353 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 TMEM74BQ9NUR3 256 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 NAT8BQ9UHF3 227 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 KCNK7Q9Y2U2 307 aa15.84■□□□□ 0.13
COL18A1-204ENST00000400337 IGLV1-36A0A0B4J1U3 117 aa15.83■□□□□ 0.13
COL18A1-204ENST00000400337 PMCHP20382 165 aa15.83■□□□□ 0.13
COL18A1-204ENST00000400337 LYPD8Q6UX82 237 aa15.83■□□□□ 0.13
COL18A1-204ENST00000400337 GDF15Q99988 308 aa15.83■□□□□ 0.13
COL18A1-204ENST00000400337 PARP14Q460N5 1801 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 SMIM17P0DL12 118 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 FSTP19883 344 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 LINC00596Q86U02 117 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 PGLYRP3Q96LB9 341 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 ABHD14AQ9BUJ0 271 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 PSG2P11465 335 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 RPS4Y1P22090 263 aaKnown RBP15.83■□□□□ 0.12
COL18A1-204ENST00000400337 FAM214BQ7L5A3 538 aa15.83■□□□□ 0.12
COL18A1-204ENST00000400337 TGIF2LYQ8IUE0 185 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms