RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SFTPA1Q8IWL2 248 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR2C3Q8N628 320 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 NAT6Q93015 286 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 CDC14BO60729 498 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 HSBP1O75506 76 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 SYNGR4O95473 234 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 FCGR3AP08637 254 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 SNRPCP09234 159 aaKnown RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR10J4P0C629 311 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 P2RY1P47900 373 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 BIVMQ86UB2 503 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR5B3Q8NH48 314 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OXGR1Q96P68 337 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 FOXI3A8MTJ6 420 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 LINC01387J3KSC0 135 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 HS3ST1O14792 307 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 GCGP01275 180 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 FOXK1P85037 733 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 CPT1CQ8TCG5 803 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 CIB3Q96Q77 187 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 WDR54Q9H977 334 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 PRSS50Q9UI38 385 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 TMED3Q9Y3Q3 217 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 MRPS18BQ9Y676 258 aaKnown RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 DYNLT3P51808 116 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 PNRC1Q12796 327 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 ARL6IP6Q8N6S5 226 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR5AU1Q8NGC0 362 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 PATE1Q8WXA2 126 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 NAA60Q9H7X0 242 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 SLC25A22Q9H936 323 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 PLSCR2Q9NRY7 297 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 CEP250Q9BV73 2442 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 B4DEV8 164 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 HRKO00198 91 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 HOXA6P31267 233 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 AMTP48728 403 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 EWSR1Q01844 656 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 IL13RA2Q14627 380 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 FAM27BQ5VT28 67 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR4A47Q6IF82 309 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 APCDD1LQ8NCL9 501 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR10J5Q8NHC4 309 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR10C1Q96KK4 312 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 KIAA1456Q9P272 454 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 PTGER4P35408 488 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 TIGITQ495A1 244 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 C6orf201Q7Z4U5 140 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 NFAM1Q8NET5 270 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 M1APQ8TC57 530 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 STARD4Q96DR4 205 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 CTDSP1Q9GZU7 261 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 HEYLQ9NQ87 328 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 CYTL1Q9NRR1 136 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 J3QW42 95 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 CRISP2P16562 243 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM50BP56557 158 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 PRR27Q6MZM9 219 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 SLC22A18ASQ8N1D0 253 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 OR10P1Q8NGE3 313 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 OR4A4PQ8NGN8 299 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 PLA2G2FQ9BZM2 168 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 KCNIP2Q9NS61 270 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 LOC102723996A0A087X1L8 192 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 C3orf85A0A1B0GTC6 90 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 LNP1A1A4G5 178 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 DHHO43323 396 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 PIAS2O75928 621 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 CTXN2P0C2S0 81 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 RAB7AP51149 207 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 FMODQ06828 376 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 C1QL3Q5VWW1 255 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF501Q96CX3 271 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-205ENST00000397611 DHRS3O75911 302 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 GLB1P16278 677 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 FCER1GP30273 86 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 SRSF5Q13243 272 aaKnown RBP4.76□□□□□ -1.65
PTPRD-205ENST00000397611 TMEM92Q6UXU6 159 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 SPNS3Q6ZMD2 512 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 MARS2Q96GW9 593 aaKnown RBP4.76□□□□□ -1.65
PTPRD-205ENST00000397611 TRBV11-1A0A0K0K1C0 115 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 MS4A18H0YCH9 400 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 M0R1X1 148 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 LMO1P25800 156 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 PAX5Q02548 391 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 MRPL49Q13405 166 aaKnown RBP4.76□□□□□ -1.65
PTPRD-205ENST00000397611 MS4A18Q3C1V0 323 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 WDR25Q64LD2 544 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-205ENST00000397611 OR10S1Q8NGN2 331 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 MSI2Q96DH6 328 aaKnown RBP4.76□□□□□ -1.65
PTPRD-205ENST00000397611 FOXJ2Q9P0K8 574 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 TUBD1Q9UJT1 453 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 CHEK1O14757 476 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 IGHEP01854 428 aa4.76□□□□□ -1.65
PTPRD-205ENST00000397611 GYPAP02724 150 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms