RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 C1QL1O75973 258 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 HPRT1P00492 218 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ISG15P05161 165 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 FCGR2AP12318 317 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CCL4P13236 92 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 AMY2BP19961 511 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 FUT3P21217 361 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 LMO1P25800 156 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 RPS18P62269 152 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 CSNK2A1P68400 391 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 COL10A1Q03692 680 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 IL15RAQ13261 267 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 IAH1Q2TAA2 248 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 ANKRD55Q3KP44 614 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 SP6Q3SY56 376 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 NUFIP2Q7Z417 695 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZNF100Q8IYN0 542 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TDHQ8IZJ6 230 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 NFAM1Q8NET5 270 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 CSNK2A3Q8NEV1 391 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 MRGPRDQ8TDS7 321 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ST8SIA1Q92185 356 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TOMM40LQ969M1 308 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CCDC74BQ96LY2 380 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 HIST1H2AAQ96QV6 131 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CABLES2Q9BTV7 478 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZNF160Q9HCG1 818 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 MSL2Q9HCI7 577 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TMEM242Q9NWH2 141 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 PLEK2Q9NYT0 353 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 EHFQ9NZC4 300 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 FOXJ2Q9P0K8 574 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 NAGKQ9UJ70 344 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 B3GALT5Q9Y2C3 310 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 POLR3KQ9Y2Y1 108 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 WSB1Q9Y6I7 421 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 SHANK1Q9Y566 2161 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 IGKV1D-8A0A087WSZ0 117 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 IGHV5-10-1A0A0J9YXX1 117 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 NKX6-3A6NJ46 265 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZNF705FA8MVS1 300 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 C10orf142B7Z368 130 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 C3orf80F5H4A9 247 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 K7EP13 123 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TNFSF11O14788 317 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 RRP8O43159 456 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 HSPB1P04792 205 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 GSTP1P09211 210 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZNF705DP0CH99 300 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZNF705BP0CI00 300 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 CCL3P10147 92 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 FSTP19883 344 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CCNOP22674 350 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TNFSF10P50591 281 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 FXYD4P59646 89 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 RND3P61587 244 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 RANP62826 216 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 SHBQ15464 509 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 KISS1Q15726 138 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TAF9Q16594 264 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ATP6V1FQ16864 119 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 C1orf100Q5SVJ3 147 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TSPO2Q5TGU0 170 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TMEM182Q6ZP80 229 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 SGPP2Q8IWX5 399 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CYB561D1Q8N8Q1 229 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 DTWD2Q8NBA8 298 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 NOXO1Q8NFA2 376 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 OR8G5Q8NG78 346 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ALKBH3Q96Q83 286 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 MIEN1Q9BRT3 115 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 MRPL13Q9BYD1 178 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 UBE2ZQ9H832 354 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 SRD5A3Q9H8P0 318 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ALKBH4Q9NXW9 302 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 KIAA1456Q9P272 454 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 GPR132Q9UNW8 380 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 PIGLQ9Y2B2 252 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 PTRH2Q9Y3E5 179 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 LSM5Q9Y4Y9 91 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 DMXL2Q8TDJ6 3036 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CBY3A6NI87 242 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 HSPB2A8KAH6 182 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 SMAD7O15105 426 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 TRAF3IP2O43734 574 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZFAND5O76080 213 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CYB5R3P00387 301 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 IFNA21P01568 189 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 MBPP02686 304 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 LCATP04180 440 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 CHRNB4P30926 498 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 PTGDSP41222 190 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 NOVA1P51513 510 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 QRFPP83859 136 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 PNRC1Q12796 327 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 HSPB2Q16082 182 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZNF468Q5VIY5 522 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 MEX3BQ6ZN04 569 aaKnown RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 YRDCQ86U90 279 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms