RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 USF1P22415 310 aaPredicted RBP11.05□□□□□ -0.64
SEC13-209ENST00000397117 RCVRNP35243 200 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 CEBPDP49716 269 aaPredicted RBP11.05□□□□□ -0.64
SEC13-209ENST00000397117 BCAP31P51572 246 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 EFNA4P52798 201 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 FAM201AQ5SY85 155 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 DEFB108BQ8NET1 73 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 DYRK2Q92630 601 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 C12orf4Q9NQ89 552 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 PPIAL4EA0A075B759 164 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 VWC2LB2RUY7 222 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 PPIAL4DF5H284 164 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 LGALS8O00214 317 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 PLA2G10O15496 165 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 PPIAL4FP0DN26 164 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 MDH2P40926 338 aaKnown RBP11.04□□□□□ -0.64
SEC13-209ENST00000397117 GZMKP49863 264 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 COL10A1Q03692 680 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 MZT2BQ6NZ67 158 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 PEG10Q86TG7 708 aaKnown RBP11.04□□□□□ -0.64
SEC13-209ENST00000397117 ASCC1Q8N9N2 400 aaKnown RBP11.04□□□□□ -0.64
SEC13-209ENST00000397117 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 ST6GALNAC5Q9BVH7 336 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 SEBOXQ9HB31 216 aaPredicted RBP11.04□□□□□ -0.64
SEC13-209ENST00000397117 DCAF16Q9NXF7 216 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 PPIAL4AQ9Y536 164 aa11.04□□□□□ -0.64
SEC13-209ENST00000397117 IGKV1D-17A0A075B6S4 117 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 ANKRD20A5PA0PJZ0 165 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 DTYMKP23919 212 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 COL8A2P25067 703 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 LMO1P25800 156 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 FAUP35544 74 aaKnown RBP11.03□□□□□ -0.64
SEC13-209ENST00000397117 RFX2P48378 723 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 TAS2R19P59542 299 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 MRPS11P82912 194 aaKnown RBP11.03□□□□□ -0.64
SEC13-209ENST00000397117 DYRK1AQ13627 763 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 KLF9Q13886 244 aaPredicted RBP11.03□□□□□ -0.64
SEC13-209ENST00000397117 KCNJ8Q15842 424 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 TEX36Q5VZQ5 186 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 IL17RELQ6ZVW7 336 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 GDPD3Q7L5L3 318 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 CD177Q8N6Q3 437 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 GVQW1Q8N7I0 195 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 ANGPTL6Q8NI99 470 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 CYYR1Q96J86 154 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 C7orf50Q9BRJ6 194 aaKnown RBP11.03□□□□□ -0.64
SEC13-209ENST00000397117 HDHD3Q9BSH5 251 aaPredicted RBP11.03□□□□□ -0.64
SEC13-209ENST00000397117 CHST6Q9GZX3 395 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 PPA2Q9H2U2 334 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 RIMS4Q9H426 269 aaPredicted RBP11.03□□□□□ -0.64
SEC13-209ENST00000397117 ZNF107Q9UII5 783 aaPredicted RBP11.03□□□□□ -0.64
SEC13-209ENST00000397117 DYSFO75923 2080 aa11.03□□□□□ -0.64
SEC13-209ENST00000397117 NKX6-3A6NJ46 265 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 ZNF736B4DX44 427 aaPredicted RBP11.02□□□□□ -0.64
SEC13-209ENST00000397117 LYNX1G3V0Z9 82 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 LYRM1O43325 122 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 LY6HO94772 140 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 GYPAP02724 150 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 TFF1P04155 84 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 AKAIN1P0CW23 69 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 LYNX1P0DP58 116 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 DAOP14920 347 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 AMY2BP19961 511 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 HLA-DMAP28067 261 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 ATXN7L3Q14CW9 347 aaPredicted RBP11.02□□□□□ -0.64
SEC13-209ENST00000397117 STUMQ69YW2 141 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 HOGA1Q86XE5 327 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 TMEM229BQ8NBD8 167 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 DEDD2Q8WXF8 326 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 MSI2Q96DH6 328 aaKnown RBP11.02□□□□□ -0.64
SEC13-209ENST00000397117 C11orf54Q9H0W9 315 aaPredicted RBP11.02□□□□□ -0.64
SEC13-209ENST00000397117 ING3Q9NXR8 418 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 ZNF230Q9UIE0 474 aaPredicted RBP11.02□□□□□ -0.64
SEC13-209ENST00000397117 KCNS2Q9ULS6 477 aa11.02□□□□□ -0.64
SEC13-209ENST00000397117 PSPNO60542 156 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 CD3DP04234 171 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 HNRNPCP07910 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
SEC13-209ENST00000397117 FCGR3AP08637 254 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 KCNJ3P48549 501 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 GRK1Q15835 563 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 STEAP1BQ6NZ63 245 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 ZNF561Q8N587 486 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 NEURL2Q9BR09 285 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 ZNF665Q9H7R5 613 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 TMEM165Q9HC07 324 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 MYOZ1Q9NP98 299 aaPredicted RBP11.02□□□□□ -0.65
SEC13-209ENST00000397117 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 ZNF222Q9UK12 451 aa11.02□□□□□ -0.65
SEC13-209ENST00000397117 TMEM82A0PJX8 343 aa11.01□□□□□ -0.65
SEC13-209ENST00000397117 NAP1L6A6NFF2 107 aa11.01□□□□□ -0.65
SEC13-209ENST00000397117 MT-ND4P03905 459 aa11.01□□□□□ -0.65
SEC13-209ENST00000397117 SPNP16150 400 aa11.01□□□□□ -0.65
SEC13-209ENST00000397117 TBPP20226 339 aa11.01□□□□□ -0.65
SEC13-209ENST00000397117 OR3A1P47881 315 aa11.01□□□□□ -0.65
SEC13-209ENST00000397117 BTG1P62324 171 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms