RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 RTP5Q14D33 572 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 TSPO2Q5TGU0 170 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 JMJD6Q6NYC1 403 aaPredicted RBP9.19□□□□□ -0.94
COL4A4-201ENST00000396625 BTLAQ7Z6A9 289 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 OR8I2Q8N0Y5 310 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 SLC37A2Q8TED4 501 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 PDXPQ96GD0 296 aa9.19□□□□□ -0.94
COL4A4-201ENST00000396625 ABCA3Q99758 1704 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 RGP1Q92546 391 aaPredicted RBP9.18□□□□□ -0.94
COL4A4-201ENST00000396625 C8orf44Q96CB5 159 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 FGF20Q9NP95 211 aaPredicted RBP9.18□□□□□ -0.94
COL4A4-201ENST00000396625 AURKAIP1Q9NWT8 199 aaPredicted RBP9.18□□□□□ -0.94
COL4A4-201ENST00000396625 ALS2Q96Q42 1657 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 COX7A1P24310 79 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 FAM53AQ6NSI3 398 aaPredicted RBP9.18□□□□□ -0.94
COL4A4-201ENST00000396625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.18□□□□□ -0.94
COL4A4-201ENST00000396625 SYT8Q8NBV8 401 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 OR8B3Q8NGG8 313 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 IGHV3-43A0A0B4J1X8 118 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 FCGR3AP08637 254 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 IGHV3-43DP0DP04 118 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 STPG2Q8N412 459 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 ALG14Q96F25 216 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 TRAV8-7A0A075B6U6 113 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 F2RL2O00254 374 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 IGHV4-34P06331 123 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM174Q8WUU8 243 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 SLC25A17O43808 307 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 IL4P05112 153 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 CEACAM3P40198 252 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 WDR13Q9H1Z4 485 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 MTFP1Q9UDX5 166 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 FGF17O60258 216 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 APELAP0DMC3 54 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 P2RY1P47900 373 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 CACNG7P62955 275 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 NUBPLQ8TB37 319 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 B9D1Q9UPM9 204 aa9.18□□□□□ -0.94
COL4A4-201ENST00000396625 IGHV3-13P01766 116 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 IGHV3-7P01780 117 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 LYPD8Q6UX82 237 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 RFLNAQ6ZTI6 216 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 LTBP3Q9NS15 1303 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 DDTP30046 118 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 ZNF83P51522 516 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 CCSMST1Q4G0I0 132 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 FAHD2BQ6P2I3 314 aaPredicted RBP9.17□□□□□ -0.94
COL4A4-201ENST00000396625 ADAMTS5Q9UNA0 930 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 IGKV3-7A0A075B6H7 116 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 TMSB15BA0A087X1C1 80 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 H0YIG0 161 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 SELENOPP49908 381 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 RELQ04864 619 aaPredicted RBP9.17□□□□□ -0.94
COL4A4-201ENST00000396625 FAHD1Q6P587 224 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 CDC42EP3Q9UKI2 254 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 DDX60LQ5H9U9 1706 aaKnown RBP9.17□□□□□ -0.94
COL4A4-201ENST00000396625 F11P03951 625 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 PRSS2P07478 247 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 MRGPRDQ8TDS7 321 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 R3HDM4Q96D70 268 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 TIMP4Q99727 224 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM210A6NLX4 147 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 OR4C45A6NMZ5 311 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 MFAP2P55001 183 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 ZNF506Q5JVG8 444 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 NUDT8Q8WV74 236 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 SFRP2Q96HF1 295 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 TMUB1Q9BVT8 246 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 RABAC1Q9UI14 185 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 STARD10Q9Y365 291 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 PLAURQ03405 335 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 FAM222BQ8WU58 562 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 VCX2Q9H322 139 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 PTPRFP10586 1907 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 ACACAQ13085 2346 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 SLC35B1P78383 322 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 LILRA3Q8N6C8 439 aaPredicted RBP9.17□□□□□ -0.94
COL4A4-201ENST00000396625 CRISPLD2Q9H0B8 497 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 TRDCB7Z8K6 153 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 FCMRO60667 390 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 MMP9P14780 707 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 RHNO1Q9BSD3 238 aa9.17□□□□□ -0.94
COL4A4-201ENST00000396625 DNAJB12Q9NXW2 375 aaKnown RBP9.17□□□□□ -0.94
COL4A4-201ENST00000396625 hADV38S2A0JD32 116 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 KBTBD11O94819 623 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 RNPS1Q15287 305 aaKnown RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 C1QTNF12Q5T7M4 302 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 RTN4RL1Q86UN2 441 aaPredicted RBP9.16□□□□□ -0.94
COL4A4-201ENST00000396625 LDLRAD3Q86YD5 345 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 CCL17Q92583 94 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 CEACAM16Q2WEN9 425 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 VSTM2AQ8TAG5 236 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 OIT3Q8WWZ8 545 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 LRRC3BQ96PB8 259 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 TMEM204Q9BSN7 226 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 SLC25A37Q9NYZ2 338 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 HS3ST3A1Q9Y663 406 aa9.16□□□□□ -0.94
COL4A4-201ENST00000396625 TRGV8A0A0C4DH27 118 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms