RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 GAPTQ8N292 157 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 GPR137CQ8N3F9 429 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 SVIPQ8NHG7 77 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 POC1BQ8TC44 478 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 SCGB1C1Q8TD33 95 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 UCN2Q96RP3 112 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 TM2D1Q9BX74 207 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 PLK3Q9H4B4 646 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 SIRT7Q9NRC8 400 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 RPRMQ9NS64 109 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 CBLN4Q9NTU7 201 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 NCOR1O75376 2440 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 TRDCB7Z8K6 153 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 MSR1P21757 451 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 BMP5P22003 454 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 MALLQ13021 153 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 BATFQ16520 125 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF506Q5JVG8 444 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF100Q8IYN0 542 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 UBALD1Q8TB05 177 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 CEP192Q8TEP8 1941 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 A0A087WWC5 75 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 IGKV1-12A0A0C4DH73 117 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 RRP8O43159 456 aaKnown RBP8.49□□□□□ -1.05
TRIM39-203ENST00000396547 PITX3O75364 302 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 IGKV1D-12P01611 117 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 METTL15P1P0C7V9 234 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 CCNOP22674 350 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 SPCS3P61009 180 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 SLC35E3Q7Z769 313 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 OR10A7Q8NGE5 316 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 DDA1Q9BW61 102 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 PITPNC1Q9UKF7 332 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 A8MWP6 167 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 OR4A8P0C604 315 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF25P17030 456 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-203ENST00000396547 RSPO1Q2MKA7 263 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-203ENST00000396547 KIAA0895LQ68EN5 471 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF774Q6NX45 483 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 OSR2Q8N2R0 312 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 SNIP1Q8TAD8 396 aaKnown RBP8.49□□□□□ -1.05
TRIM39-203ENST00000396547 SSC4DQ8WTU2 575 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 GNPNAT1Q96EK6 184 aaPredicted RBP8.49□□□□□ -1.05
TRIM39-203ENST00000396547 OXGR1Q96P68 337 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 SMIM7Q9BQ49 75 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 PCGF1Q9BSM1 259 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 CCL28Q9NRJ3 127 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 FGF21Q9NSA1 209 aa8.49□□□□□ -1.05
TRIM39-203ENST00000396547 DOCK11Q5JSL3 2073 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 NPIPA2E9PIF3 369 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 NPIPA3F8WFD2 350 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 BCAT2O15382 392 aaPredicted RBP8.48□□□□□ -1.05
TRIM39-203ENST00000396547 CNOT4O95628 575 aaKnown RBP8.48□□□□□ -1.05
TRIM39-203ENST00000396547 HBE1P02100 147 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 SCTP09683 121 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 NPBWR2P48146 333 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 PLPPR5Q32ZL2 321 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 PLCXD3Q63HM9 321 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 FAM90A2PQ658T7 463 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 RTL6Q6ICC9 239 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 C16orf82Q7Z2V1 217 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 FAM185AQ8N0U4 392 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 PRR18Q8N4B5 295 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 OR6X1Q8NH79 312 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 ELOVL1Q9BW60 279 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 WNT5BQ9H1J7 359 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 LYRM2Q9NU23 88 aaPredicted RBP8.48□□□□□ -1.05
TRIM39-203ENST00000396547 FUT9Q9Y231 359 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 LOC102723971A0A1B0GUV8 181 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 CD33P20138 364 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 CCL1P22362 96 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 LMO1P25800 156 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.48□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF818PQ6ZRF7 136 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 SLC25A26Q70HW3 274 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 SELENOHQ8IZQ5 122 aaKnown RBP8.48□□□□□ -1.05
TRIM39-203ENST00000396547 D2HGDHQ8N465 521 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 OR1K1Q8NGR3 316 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 OR1P1Q8NH06 330 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 MOB3AQ96BX8 217 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 RBMXL1Q96E39 390 aaKnown RBP8.48□□□□□ -1.05
TRIM39-203ENST00000396547 TMEM222Q9H0R3 208 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 IL17BQ9UHF5 180 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 ADAMTS9Q9P2N4 1935 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 TMEM131Q92545 1883 aa8.48□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF705FA8MVS1 300 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-203ENST00000396547 CYB5R3P00387 301 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-203ENST00000396547 NRASP01111 189 aa8.47□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF705DP0CH99 300 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF705BP0CI00 300 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-203ENST00000396547 RPL29P47914 159 aaKnown RBP8.47□□□□□ -1.05
TRIM39-203ENST00000396547 H3F3AP84243 136 aa8.47□□□□□ -1.05
TRIM39-203ENST00000396547 JOSD1Q15040 202 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-203ENST00000396547 RAET1LQ5VY80 246 aa8.47□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF705AQ6ZN79 300 aaPredicted RBP8.47□□□□□ -1.05
TRIM39-203ENST00000396547 SLC16A14Q7RTX9 510 aa8.47□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF441Q8N8Z8 693 aa8.47□□□□□ -1.05
TRIM39-203ENST00000396547 OIT3Q8WWZ8 545 aa8.47□□□□□ -1.05
TRIM39-203ENST00000396547 SPTSSAQ969W0 71 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms