RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 RFLNAQ6ZTI6 216 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM61Q8N0U2 210 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM252Q8N6L7 170 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 UBAC2Q8NBM4 344 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 OR1S1Q8NH92 325 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 OR13C6PQ8NH95 151 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 GRPEL2Q8TAA5 225 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 TMEM159Q96B96 161 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ZNF689Q96CS4 500 aaPredicted RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 LINC00477Q96M19 166 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 TSC22D3Q99576 134 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 ARHGDIGQ99819 225 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 SLC25A31Q9H0C2 315 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 DPM3Q9P2X0 92 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 PKIGQ9Y2B9 76 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 HSPB11Q9Y547 144 aa3.78□□□□□ -1.8
GABPB1-204ENST00000396464 YTHDF2Q9Y5A9 579 aaKnown RBP3.78□□□□□ -1.8
GABPB1-204ENST00000396464 KIF1BO60333 1816 aa3.78□□□□□ -1.81
GABPB1-204ENST00000396464 RFX7Q2KHR2 1363 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 SYNMO15061 1565 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 REREQ9P2R6 1566 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 MROH2AA6NES4 1674 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 E9PCH4 1651 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 CLUHO75153 1309 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 EFCAB6Q5THR3 1501 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 IGHV1-69DA0A0B4J2H0 117 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 CIB4A0PJX0 185 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 K7EQS6 105 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 GCM2O75603 506 aaPredicted RBP3.77□□□□□ -1.81
GABPB1-204ENST00000396464 GPR75O95800 540 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 TRBV12-3P01733 135 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 ZSCAN5DPP0CG00 497 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 CD79AP11912 226 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 OMGP23515 440 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 MT3P25713 68 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 PSMB2P49721 201 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 P2RX1P51575 399 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 DSCR9P59020 149 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 TAS2R19P59542 299 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 ESRRGP62508 458 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 HPCAP84074 193 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 SNRNP35Q16560 246 aaKnown RBP3.77□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF506Q5JVG8 444 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 ADAMTSL4-AS1Q5T5F5 129 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 FAM78BQ5VT40 261 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 SMARCD3Q6STE5 483 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 ALKAL1Q6UXT8 129 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 GSG1LQ6UXU4 331 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 GRINAQ7Z429 371 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF589Q86UQ0 364 aaPredicted RBP3.77□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF567Q8N184 647 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 C1orf158Q8N1D5 194 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 CSNK1G2-AS1Q8NCQ2 148 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 TMBIM1Q969X1 311 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 SEH1LQ96EE3 360 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 DIRAS2Q96HU8 199 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 PPP1R2P1Q96PQ5 205 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 GINS3Q9BRX5 216 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 MARVELD1Q9BSK0 173 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 TMEM138Q9NPI0 162 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 CCL28Q9NRJ3 127 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 AIG1Q9NVV5 245 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 PALLDQ8WX93 1383 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 TONSLQ96HA7 1378 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 C3P01024 1663 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 PREX1Q8TCU6 1659 aa3.77□□□□□ -1.81
GABPB1-204ENST00000396464 VWA8A3KMH1 1905 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 SIGLEC1Q9BZZ2 1709 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 C2orf16Q68DN1 1984 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 ROCK2O75116 1388 aaKnown RBP3.76□□□□□ -1.81
GABPB1-204ENST00000396464 FAM183AA6NL82 134 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 EEF1E1-BLOC1S5C9J1V9 151 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 EEF1E1O43324 174 aaKnown RBP3.76□□□□□ -1.81
GABPB1-204ENST00000396464 TBL1XO60907 577 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 MT-CO2P00403 227 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 IGHV3-48P01763 117 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 TTRP02766 147 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 ATP5G1P05496 136 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 OR5G3P0C626 314 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 C1GALT1C1LP0DN25 315 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 SRP9P49458 86 aaKnown RBP3.76□□□□□ -1.81
GABPB1-204ENST00000396464 ZNF133P52736 654 aaPredicted RBP3.76□□□□□ -1.81
GABPB1-204ENST00000396464 H2BFSP57053 126 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 LINC01547P58512 204 aaPredicted RBP3.76□□□□□ -1.81
GABPB1-204ENST00000396464 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 C6orf99Q4VX62 202 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 NHLRC3Q5JS37 347 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 TEX36Q5VZQ5 186 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 OPN5Q6U736 354 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 C6orf120Q7Z4R8 191 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 TGIF2LYQ8IUE0 185 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 OR4M1Q8NGD0 313 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 OR9I1Q8NGQ6 314 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 OR2G3Q8NGZ4 309 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 LZICQ8WZA0 190 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 C12orf43Q96C57 262 aaKnown RBP3.76□□□□□ -1.81
GABPB1-204ENST00000396464 RNF157Q96PX1 679 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 PRSS27Q9BQR3 290 aa3.76□□□□□ -1.81
GABPB1-204ENST00000396464 SEC22CQ9BRL7 303 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms