RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 OR8J1Q8NGP2 316 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 RFKQ969G6 155 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 CIB1Q99828 191 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 BARHL1Q9BZE3 327 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 ZCCHC4Q9H5U6 513 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 LINC00574Q9H8X3 128 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 SCOCQ9UIL1 159 aa16.57■□□□□ 0.24
TRAF4-203ENST00000394925 RYR2Q92736 4967 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 HUWE1Q7Z6Z7 4374 aaKnown RBP16.56■□□□□ 0.24
TRAF4-203ENST00000394925 TRAV39A0A0B4J263 110 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 TRAV24A0A0B4J272 114 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 NPIPB11E5RHQ5 1161 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 HSD17B6O14756 317 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 DBTP11182 482 aaKnown RBP16.56■□□□□ 0.24
TRAF4-203ENST00000394925 SSTR5P35346 364 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 CDX1P47902 265 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-203ENST00000394925 REG1BP48304 166 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 MTNR1BP49286 362 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 ZP1P60852 638 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 GPR50Q13585 617 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 EBI3Q14213 229 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 KISS1Q15726 138 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 TGIF2LXQ8IUE1 241 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 ZDHHC13Q8IUH4 622 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 CNIH3Q8TBE1 160 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 EAF1Q96JC9 268 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-203ENST00000394925 GON7Q9BXV9 100 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 GABARAPL1Q9H0R8 117 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 ABCG5Q9H222 651 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 NCOR1P1Q9H4R4 102 aa16.56■□□□□ 0.24
TRAF4-203ENST00000394925 IGHV1-3A0A0C4DH29 117 aa16.55■□□□□ 0.24
TRAF4-203ENST00000394925 CCRL2O00421 344 aa16.55■□□□□ 0.24
TRAF4-203ENST00000394925 FOXE3Q13461 319 aa16.55■□□□□ 0.24
TRAF4-203ENST00000394925 RSBN1Q5VWQ0 802 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-203ENST00000394925 KCTD20Q7Z5Y7 419 aa16.55■□□□□ 0.24
TRAF4-203ENST00000394925 PLPPR1Q8TBJ4 325 aa16.55■□□□□ 0.24
TRAF4-203ENST00000394925 RIBC2Q9H4K1 309 aa16.55■□□□□ 0.24
TRAF4-203ENST00000394925 LIN7CQ9NUP9 197 aaKnown RBP16.55■□□□□ 0.24
TRAF4-203ENST00000394925 SORL1Q92673 2214 aa16.55■□□□□ 0.24
TRAF4-203ENST00000394925 DAPL1A0PJW8 107 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 SLC16A6O15403 523 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 GAPDHP04406 335 aaKnown RBP16.54■□□□□ 0.24
TRAF4-203ENST00000394925 CCR9P51686 369 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 ZNF816Q0VGE8 651 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-203ENST00000394925 ZSCAN26Q16670 478 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 SLC16A12Q6ZSM3 486 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 AMIGO2Q86SJ2 522 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 Q8N9W7 124 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 OR10A7Q8NGE5 316 aa16.54■□□□□ 0.24
TRAF4-203ENST00000394925 ZNF256Q9Y2P7 627 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-203ENST00000394925 OR4C45A6NMZ5 311 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 J3QLW9 94 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 MPZL2O60487 215 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 ELANEP08246 267 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 ZNF19P17023 458 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 CHATP28329 748 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 ZNF260Q3ZCT1 412 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 ZNF691Q5VV52 312 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 LPCAT4Q643R3 524 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 ELP2Q6IA86 826 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 Q8N6K4 173 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 OR2T10Q8NGZ9 312 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 MUC7Q8TAX7 377 aa16.53■□□□□ 0.24
TRAF4-203ENST00000394925 SULT1B1O43704 296 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 LY86O95711 162 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 FASP25445 335 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 ALKBH1Q13686 389 aaKnown RBP16.52■□□□□ 0.24
TRAF4-203ENST00000394925 CASC10Q5T4H9 136 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 IZUMO1Q8IYV9 350 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 RNF152Q8N8N0 203 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 OR5D14Q8NGL3 314 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 SLC7A6OSQ96CW6 309 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-203ENST00000394925 RNFT2Q96EX2 444 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 PELI1Q96FA3 418 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 GABARAPL3Q9BY60 117 aa16.52■□□□□ 0.24
TRAF4-203ENST00000394925 SIRT4Q9Y6E7 314 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-203ENST00000394925 J3QRE1 110 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 RRP9O43818 475 aaKnown RBP16.51■□□□□ 0.23
TRAF4-203ENST00000394925 IL13RA2Q14627 380 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 PIGYQ3MUY2 71 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 SERPINA12Q8IW75 414 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 PXT1Q8NFP0 134 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 OR10K1Q8NGX5 313 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 C4orf3Q8WVX3 66 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 C4orf36Q96KX1 117 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 RASL11BQ9BPW5 248 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 PLSCR3Q9NRY6 295 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 FAM118AQ9NWS6 357 aa16.51■□□□□ 0.23
TRAF4-203ENST00000394925 KCNJ3P48549 501 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 PAX5Q02548 391 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 SATL1Q86VE3 508 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 Q8NFD4 153 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 OR11H1Q8NG94 326 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 S1PR3Q99500 378 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 HSPB9Q9BQS6 159 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 ZNF581Q9P0T4 197 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 SMAD5-AS1Q9Y6J3 95 aa16.5■□□□□ 0.23
TRAF4-203ENST00000394925 SACSQ9NZJ4 4579 aa16.49■□□□□ 0.23
TRAF4-203ENST00000394925 MOSP00540 346 aa16.49■□□□□ 0.23
TRAF4-203ENST00000394925 IGHG4P01861 327 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms