RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ZNF806P0C7X5 589 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 IGHV1-2P23083 117 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 CXorf66Q5JRM2 361 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-202ENST00000394888 FBXW9Q5XUX1 488 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 H1FOOQ8IZA3 346 aaPredicted RBP13.06□□□□□ -0.32
CPSF7-202ENST00000394888 CACFD1Q9UGQ2 172 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 MEMO1Q9Y316 297 aa13.06□□□□□ -0.32
CPSF7-202ENST00000394888 MEX3AA1L020 520 aaKnown RBP13.05□□□□□ -0.32
CPSF7-202ENST00000394888 SMPD2O60906 423 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 MRPL21Q7Z2W9 205 aaKnown RBP13.05□□□□□ -0.32
CPSF7-202ENST00000394888 DLL3Q9NYJ7 618 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 JTBO76095 146 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 SYNGR4O95473 234 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 SCGB1D2O95969 90 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 SNCAP37840 140 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 ASCL1P50553 236 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 SPATA46Q5T0L3 261 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 HAGHLQ6PII5 290 aaPredicted RBP13.05□□□□□ -0.32
CPSF7-202ENST00000394888 FBXW12Q6X9E4 464 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 LGI3Q8N145 548 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 TMED3Q9Y3Q3 217 aa13.05□□□□□ -0.32
CPSF7-202ENST00000394888 K7N7A8 449 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 ID3Q02535 119 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 Q6ZRG5 221 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 Q6ZRM9 215 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 C11orf53Q8IXP5 236 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 OR1A1Q9P1Q5 309 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 KLF13Q9Y2Y9 288 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-202ENST00000394888 NPIPB11E5RHQ5 1161 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 PRSS44E7EML9 344 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 RNASEK-C17orf49H0YIS7 233 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 SFTA3P0C7M3 94 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPSF7-202ENST00000394888 OR2T2Q6IF00 324 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 ABHD14AQ9BUJ0 271 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 SLC33A1O00400 549 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-202ENST00000394888 PGLYRP1O75594 196 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-202ENST00000394888 HEXAP06865 529 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 SEC11BP0C7V7 166 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 PRKACAP17612 351 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 CA6P23280 308 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 TNFSF10P50591 281 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 CLN3Q13286 438 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 EIF4EBP1Q13541 118 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-202ENST00000394888 FAM53AQ6NSI3 398 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-202ENST00000394888 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
CPSF7-202ENST00000394888 ABCA11PQ4W5N1 156 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 GPR157Q5UAW9 335 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 SUMF1Q8NBK3 374 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 PKIBQ9C010 78 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 OR51B6Q9H340 312 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 HES4Q9HCC6 221 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 IGHG3P01860 377 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 SELEP16581 610 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 IGFL2Q6UWQ7 119 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 Q6ZR03 302 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 DPPA2Q7Z7J5 298 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 LINC00596Q86U02 117 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 PARD6AQ9NPB6 346 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 ASCL3Q9NQ33 180 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 KCNIP3Q9Y2W7 256 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 H0YL77 283 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 POLR2GP62487 172 aaKnown RBP eCLIP13.03□□□□□ -0.32
CPSF7-202ENST00000394888 SLC10A1Q14973 349 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 SPSB3Q6PJ21 355 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 ZNF497Q6ZNH5 498 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 SVBPQ8N300 66 aa13.03□□□□□ -0.32
CPSF7-202ENST00000394888 IFNA21P01568 189 aa13.02□□□□□ -0.32
CPSF7-202ENST00000394888 MEX3BQ6ZN04 569 aaKnown RBP13.02□□□□□ -0.32
CPSF7-202ENST00000394888 NARS2Q96I59 477 aaKnown RBP13.02□□□□□ -0.32
CPSF7-202ENST00000394888 MPC1Q9Y5U8 109 aa13.02□□□□□ -0.32
CPSF7-202ENST00000394888 DSCAML1Q8TD84 2053 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 A0A1B0GW55 424 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 MED19A0JLT2 244 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-202ENST00000394888 FAM24AA6NFZ4 105 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 ADAM20O43506 726 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 SLC34A2O95436 690 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 DUX4L2P0CJ85 424 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 DUX4L3P0CJ86 424 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 DUX4L4P0CJ87 422 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 DUX4L5P0CJ88 424 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 DUX4L6P0CJ89 424 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 DUX4L7P0CJ90 424 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 PLGLB1Q02325 96 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 MKXQ8IYA7 352 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 CCDC36Q8IYA8 594 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 FAM185AQ8N0U4 392 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 SCCPDHQ8NBX0 429 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 OR5D13Q8NGL4 314 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 SECTM1Q8WVN6 248 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 LYRM2Q9NU23 88 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-202ENST00000394888 DUX4Q9UBX2 424 aa13.02□□□□□ -0.33
CPSF7-202ENST00000394888 COLCA2A8K830 154 aa13.01□□□□□ -0.33
CPSF7-202ENST00000394888 F8W036 122 aa13.01□□□□□ -0.33
CPSF7-202ENST00000394888 TPD52L2O43399 206 aaKnown RBP13.01□□□□□ -0.33
CPSF7-202ENST00000394888 BLOC1S1P78537 153 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms