RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 OR5D18Q8NGL1 313 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 OR2T10Q8NGZ9 312 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 LHX4Q969G2 390 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 MFRPQ9BY79 579 aa4.99□□□□□ -1.61
RFFL-202ENST00000394597 PI4KAP42356 2102 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 TRAV8-7A0A075B6U6 113 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 MAP1LC3B2A6NCE7 125 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 MSGN1A6NI15 193 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 SLC22A20A6NK97 555 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PRR33A8MZF0 331 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 GDF9O60383 454 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 CST7O76096 145 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ABHD16AO95870 558 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 OR5G3P0C626 314 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 CD59P13987 128 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 GLRA1P23415 457 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ZBTB25P24278 435 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 GCH1P30793 250 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 TNFSF10P50591 281 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ELLP55199 621 aaPredicted RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 GLIPR1L1Q6UWM5 242 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 HEPN1Q6WQI6 88 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PPP1R32Q7Z5V6 425 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 Q8WTZ3 238 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 STARD4Q96DR4 205 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 TRIB1Q96RU8 372 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BLQ99880 126 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ZNF2Q9BSG1 426 aaPredicted RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 ALKBH7Q9BT30 221 aaPredicted RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 FAAP24Q9BTP7 215 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 SF3B5Q9BWJ5 86 aaKnown RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 MAP1LC3BQ9GZQ8 125 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PBOV1Q9GZY1 135 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 SMDT1Q9H4I9 107 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 LRP5LA4QPB2 252 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 HPRT1P00492 218 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 NPSP0C0P6 89 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ZNF17P17021 662 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 TFPI2P48307 235 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 MTCP1P56278 107 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PNLIPRP3Q17RR3 467 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 TMEM241Q24JQ0 296 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 CEACAM16Q2WEN9 425 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 LY6G6FQ5SQ64 297 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PLCXD3Q63HM9 321 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 OR2M7Q8NG81 312 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 OR4F5Q8NH21 305 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 OR51E1Q8TCB6 317 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 MUCL1Q96DR8 90 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 SMIM8Q96KF7 97 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 SPACA5Q96QH8 159 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 OR4F4Q96R69 305 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ZNF442Q9H7R0 627 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 MRPS18BQ9Y676 258 aaKnown RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 M0R135 149 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 DNPH1O43598 174 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 IGHV2-5P01817 119 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 CRYABP02511 175 aaKnown RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 TK1P04183 234 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 SP1P08047 785 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PMCHP20382 165 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 KITLGP21583 273 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ARR3P36575 388 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PPP1CCP36873 323 aaKnown RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 HINT1P49773 126 aaPredicted RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 FHITP49789 147 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 RNPS1Q15287 305 aaKnown RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 MPV17LQ2QL34 196 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 BSXQ3C1V8 233 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 SP6Q3SY56 376 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ZNF684Q5T5D7 378 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ZNF664Q8N3J9 261 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 ZNF799Q96GE5 643 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 IMMP1LQ96LU5 166 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 GPX7Q96SL4 187 aaPredicted RBP4.98□□□□□ -1.61
RFFL-202ENST00000394597 MAGT1Q9H0U3 335 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 Q9N2K0 584 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 LRP12Q9Y561 859 aa4.98□□□□□ -1.61
RFFL-202ENST00000394597 PLXNB3Q9ULL4 1909 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 IGKV1D-42A0A075B6H8 117 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 FIGNL2A6NMB9 653 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 A8MWP6 167 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 RAB29O14966 203 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 KLF4O43474 513 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 SSSCA1O60232 199 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 GAPDHP04406 335 aaKnown RBP4.97□□□□□ -1.61
RFFL-202ENST00000394597 SERPINE2P07093 398 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 ADRA2CP18825 462 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 FPR2P25090 351 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 ECI1P42126 302 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 PPP1CBP62140 327 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 ZNF90Q03938 601 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 TLE1Q04724 770 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 S100A7AQ86SG5 101 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 SHISA5Q8N114 240 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 RFLNBQ8N5W9 214 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 AQP10Q96PS8 301 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 ATP5SQ99766 215 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 FOXB1Q99853 325 aa4.97□□□□□ -1.61
RFFL-202ENST00000394597 RARRES2Q99969 163 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms