RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 FUT9Q9Y231 359 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 IGKV1D-8A0A087WSZ0 117 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 IGHV3-20A0A0C4DH32 117 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 IL11P20809 199 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 BLVRBP30043 206 aaPredicted RBP16.31■□□□□ 0.2
HOXC6-202ENST00000394331 SRPXP78539 464 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 SP6Q3SY56 376 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 OR5C1Q8NGR4 320 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 KCNK17Q96T54 332 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 H7BYZ3 331 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 TDGF1P13385 188 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF41P51814 821 aaPredicted RBP16.31■□□□□ 0.2
HOXC6-202ENST00000394331 RHBDD2Q6NTF9 364 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 DDIT4LQ96D03 193 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 ANAPC16Q96DE5 110 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 CYYR1Q96J86 154 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 BTF3L4Q96K17 158 aa16.31■□□□□ 0.2
HOXC6-202ENST00000394331 ELL3Q9HB65 397 aaPredicted RBP16.31■□□□□ 0.2
HOXC6-202ENST00000394331 TRBV11-1A0A0K0K1C0 115 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 CHRNB4P30926 498 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 FBXW4P57775 412 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 LCN2P80188 198 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 TLE3Q04726 772 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 MRGPRDQ8TDS7 321 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 EXTL1Q92935 676 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 SLC35E1Q96K37 410 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 SPACA5Q96QH8 159 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 GLRX2Q9NS18 164 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF701Q9NV72 531 aaPredicted RBP16.3■□□□□ 0.2
HOXC6-202ENST00000394331 PRSS50Q9UI38 385 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 PTRH2Q9Y3E5 179 aaKnown RBP16.3■□□□□ 0.2
HOXC6-202ENST00000394331 RP1P56715 2156 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 PROB1E7EW31 1015 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 FMODQ06828 376 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 MRGPRGQ86SM5 289 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 LINC00346Q8IVM7 164 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 SLC25A45Q8N413 288 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 OR2V1Q8NHB1 315 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 TMEM37Q8WXS4 190 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 REEP6Q96HR9 211 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 ATP5SQ99766 215 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 NECAP2Q9NVZ3 263 aa16.3■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF705FA8MVS1 300 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF705DP0CH99 300 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF705BP0CI00 300 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 IGFBP4P22692 258 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 POU3F1Q03052 451 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 C16orf47Q6ZP98 133 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 SPIN2AQ99865 258 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 SPIN2BQ9BPZ2 258 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 REPIN1Q9BWE0 567 aaKnown RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 CENPMQ9NSP4 180 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 RNF150Q9ULK6 438 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 FREM3P0C091 2139 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 IGLV3-12A0A075B6K2 115 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 IFNA1P01562 189 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 CCL1P22362 96 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 UCP3P55916 312 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 ERVS71-1P61550 626 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 BSXQ3C1V8 233 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF787Q6DD87 383 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 SLC38A9Q8NBW4 561 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 SLAMF6Q96DU3 332 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 PCGF1Q9BSM1 259 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 SLC2A9Q9NRM0 540 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 B3GAT1Q9P2W7 334 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 C2orf72A6NCS6 295 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 VSTM2BA6NLU5 285 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 NKX2-1P43699 371 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 DYNLT3P51808 116 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF133P52736 654 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 ANKRD37Q7Z713 158 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 IL22RA1Q8N6P7 574 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 NFAM1Q8NET5 270 aaPredicted RBP16.29■□□□□ 0.2
HOXC6-202ENST00000394331 NUDT22Q9BRQ3 303 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 TMEM106BQ9NUM4 274 aa16.29■□□□□ 0.2
HOXC6-202ENST00000394331 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 TRAV39A0A0B4J263 110 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 PPBPP02775 128 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 OR2T10Q8NGZ9 312 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 KCNE4Q8WWG9 221 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 MOB3AQ96BX8 217 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 SERINC1Q9NRX5 453 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 MCTS1Q9ULC4 181 aaKnown RBP16.28■□□□□ 0.2
HOXC6-202ENST00000394331 KBTBD11O94819 623 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 ENDOGQ14249 297 aaKnown RBP16.28■□□□□ 0.2
HOXC6-202ENST00000394331 TPTE2P1Q5T6R2 138 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 ODF3L1Q8IXM7 274 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 CCDC71LQ8N9Z2 235 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 LIME1Q9H400 295 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 ALKBH4Q9NXW9 302 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 VDAC3Q9Y277 283 aa16.28■□□□□ 0.2
HOXC6-202ENST00000394331 ZFP92A6NM28 416 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 MYF5P13349 255 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 TUBG1P23258 451 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 ADIRFQ15847 76 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 MPV17LQ2QL34 196 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 OR51E1Q8TCB6 317 aa16.27■□□□□ 0.2
HOXC6-202ENST00000394331 THAP3Q8WTV1 239 aaPredicted RBP16.27■□□□□ 0.2
HOXC6-202ENST00000394331 TP53RKQ96S44 253 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms