RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CEACAM18A8MTB9 384 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 J3QT63 122 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 RRP8O43159 456 aaKnown RBP9.46□□□□□ -0.89
TCOF1-203ENST00000394269 OR2H2O95918 312 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 SLC25A4P12235 298 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 CBR1P16152 277 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 EPHA1P21709 976 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF818PQ6ZRF7 136 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 BHLHA15Q7RTS1 189 aaPredicted RBP9.46□□□□□ -0.89
TCOF1-203ENST00000394269 DPPA2Q7Z7J5 298 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 ZNF695Q8IW36 515 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 OR2Z1Q8NG97 314 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 OR10J5Q8NHC4 309 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 RNASE11Q8TAA1 199 aaKnown RBP9.46□□□□□ -0.89
TCOF1-203ENST00000394269 RBPMSQ93062 196 aaKnown RBP9.46□□□□□ -0.89
TCOF1-203ENST00000394269 RASL12Q9NYN1 266 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 TAS2R3Q9NYW6 316 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 RNF150Q9ULK6 438 aa9.46□□□□□ -0.89
TCOF1-203ENST00000394269 MKRN2OSH3BPM6 223 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 NBL1P41271 181 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 FAM27E3Q08E93 113 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 HERPUD1Q15011 391 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 TBC1D26Q86UD7 250 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 RBMXL3Q8N7X1 1067 aaKnown RBP9.46□□□□□ -0.9
TCOF1-203ENST00000394269 SUN5Q8TC36 379 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 GLYATL2Q8WU03 294 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 S100PBPQ96BU1 408 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 OR1A1Q9P1Q5 309 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 PPP1R3CQ9UQK1 317 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 TRDCB7Z8K6 153 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 K7EPK0 472 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 CNOT4O95628 575 aaKnown RBP9.46□□□□□ -0.9
TCOF1-203ENST00000394269 RAC2P15153 192 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 OMGP23515 440 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 ID4P47928 161 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 RTP5Q14D33 572 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 MPV17LQ2QL34 196 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 FBXW12Q6X9E4 464 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 LRP11Q86VZ4 500 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 FAM71E2Q8N5Q1 922 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 OR52M1Q8NGK5 317 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 RFESDQ8TAC1 157 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 MOB3AQ96BX8 217 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 ASF1BQ9NVP2 202 aa9.46□□□□□ -0.9
TCOF1-203ENST00000394269 IGKV1-6A0A0C4DH72 117 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 C3orf85A0A1B0GTC6 90 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 MPPED1O15442 326 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 UBA52P62987 128 aaKnown RBP9.45□□□□□ -0.9
TCOF1-203ENST00000394269 IL24Q13007 206 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 SNTB1Q13884 538 aaKnown RBP9.45□□□□□ -0.9
TCOF1-203ENST00000394269 IZUMO4Q1ZYL8 232 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 FAM53AQ6NSI3 398 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-203ENST00000394269 FAM180AQ6UWF9 173 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 CCDC28AQ8IWP9 274 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 ASB13Q8WXK3 278 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 GTF3AQ92664 365 aaKnown RBP9.45□□□□□ -0.9
TCOF1-203ENST00000394269 PURGQ9UJV8 347 aaKnown RBP9.45□□□□□ -0.9
TCOF1-203ENST00000394269 POLDIP2Q9Y2S7 368 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 HECTD1Q9ULT8 2610 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 KIR2DS1A0A191URI9 304 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 PROB1E7EW31 1015 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 SHOXO15266 292 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 B3GALNT1O75752 331 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 IGHV3-13P01766 116 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 IGHV3-7P01780 117 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 OR8U9P0C7N5 309 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 ECI1P42126 302 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 KIR2DS4P43632 304 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 AESQ08117 197 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 EDDM3AQ14507 147 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 KIR2DS1Q14954 304 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 ZNF718Q3SXZ3 478 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 PRSS54Q6PEW0 395 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 SLC35G3Q8N808 338 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 POC1AQ8NBT0 407 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 OR8U1Q8NH10 309 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 LHFPL5Q8TAF8 219 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 MUCL1Q96DR8 90 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 SPACA1Q9HBV2 294 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 PLSCR4Q9NRQ2 329 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 TP53TG5Q9Y2B4 290 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 KMT2EQ8IZD2 1858 aa9.45□□□□□ -0.9
TCOF1-203ENST00000394269 AGPAT2O15120 278 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 MLNRO43193 412 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 GABRA2P47869 451 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 NUBP1P53384 320 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 TMEM187Q14656 261 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 RPL7L1Q6DKI1 246 aaKnown RBP9.44□□□□□ -0.9
TCOF1-203ENST00000394269 CCDC71LQ8N9Z2 235 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 PLPPR1Q8TBJ4 325 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 MRPL30Q8TCC3 161 aaKnown RBP9.44□□□□□ -0.9
TCOF1-203ENST00000394269 PLK3Q9H4B4 646 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 ATP23Q9Y6H3 246 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 IGHV1-18A0A0C4DH31 117 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 SH2D1BO14796 132 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 SPRY3O43610 288 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 NAPSAO96009 420 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 PET100P0DJ07 73 aa9.44□□□□□ -0.9
TCOF1-203ENST00000394269 RPL12P30050 165 aaKnown RBP9.44□□□□□ -0.9
TCOF1-203ENST00000394269 CAV2P51636 162 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms