RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 BSCL2Q96G97 398 aaPredicted RBP12.09□□□□□ -0.47
RNF41-202ENST00000394013 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
RNF41-202ENST00000394013 C1orf123Q9NWV4 160 aa12.09□□□□□ -0.47
RNF41-202ENST00000394013 LSM5Q9Y4Y9 91 aaKnown RBP12.09□□□□□ -0.47
RNF41-202ENST00000394013 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
RNF41-202ENST00000394013 BCL2L11O43521 198 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 B3GALNT1O75752 331 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 NXPH3O95157 252 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 PTBP3O95758 552 aaKnown RBP12.08□□□□□ -0.48
RNF41-202ENST00000394013 BEND4Q6ZU67 534 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 DOLPP1Q86YN1 238 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.48
RNF41-202ENST00000394013 RSRP1Q9BUV0 290 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 ATP23Q9Y6H3 246 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 LRBAP50851 2863 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 KANTRA0A1W2PQU2 76 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 CCKARP32238 428 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 TDGF1P3P51864 188 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 SNTB1Q13884 538 aaKnown RBP12.08□□□□□ -0.48
RNF41-202ENST00000394013 P2RY6Q15077 328 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 TOR2AQ5JU69 321 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 ZNF324BQ6AW86 544 aaPredicted RBP12.08□□□□□ -0.48
RNF41-202ENST00000394013 TBC1D26Q86UD7 250 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 SLC51BQ86UW2 128 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 INO80EQ8NBZ0 244 aaPredicted RBP12.08□□□□□ -0.48
RNF41-202ENST00000394013 OR2Z1Q8NG97 314 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 FAM57AQ8TBR7 257 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 ASB13Q8WXK3 278 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 TREM2Q9NZC2 230 aa12.08□□□□□ -0.48
RNF41-202ENST00000394013 ATP6V1G2-DDX39BF2Z307 99 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 SIGLEC5O15389 551 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 CRYABP02511 175 aaKnown RBP12.07□□□□□ -0.48
RNF41-202ENST00000394013 TK1P04183 234 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 KCNJ3P48549 501 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 ESCO2Q56NI9 601 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 WDR82Q6UXN9 313 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 SLC35G3Q8N808 338 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 SCARB1Q8WTV0 552 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 SLC5A7Q9GZV3 580 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 ASF1BQ9NVP2 202 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
RNF41-202ENST00000394013 A0A0D9SG52 128 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 A0A0G2JNJ9 132 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 LGALS8O00214 317 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 GFRA3O60609 400 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 SCO1O75880 301 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 OR2F2O95006 317 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 EGR1P18146 543 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 RAB14P61106 215 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 OR2F1Q13607 317 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 SLC38A6Q8IZM9 456 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 DCTN5Q9BTE1 182 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 Q9UFV3 132 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 ZSCAN5BA6NJL1 495 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 I3L521 148 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 J3QW42 95 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 MPPED1O15442 326 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 HAND1O96004 215 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 C4BPBP20851 252 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 GCH1P30793 250 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 PMELP40967 661 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 AESQ08117 197 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 IZUMO4Q1ZYL8 232 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 PRSS54Q6PEW0 395 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 SNRNP40Q96DI7 357 aaKnown RBP12.06□□□□□ -0.48
RNF41-202ENST00000394013 PIK3IP1Q96FE7 263 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 SMIM3Q9BZL3 60 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 PLK3Q9H4B4 646 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 OR2S2Q9NQN1 319 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 CYTL1Q9NRR1 136 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 ERRFI1Q9UJM3 462 aaPredicted RBP12.06□□□□□ -0.48
RNF41-202ENST00000394013 AUP1Q9Y679 476 aa12.06□□□□□ -0.48
RNF41-202ENST00000394013 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 TRBV6-7A0A0A0MS04 114 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 RRASP10301 218 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
RNF41-202ENST00000394013 ZNF345Q14585 488 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 AANATQ16613 207 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 ZNF718Q3SXZ3 478 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 TMEM268Q5VZI3 342 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 RGS7BPQ6MZT1 257 aaPredicted RBP12.05□□□□□ -0.48
RNF41-202ENST00000394013 LIAT1Q6ZQX7 453 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 C18orf12Q96KH6 178 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 REG4Q9BYZ8 158 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 TRAPPC2LQ9UL33 140 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 POLDIP2Q9Y2S7 368 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 USF3Q68DE3 2245 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 C3orf85A0A1B0GTC6 90 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 TUSC2O75896 110 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 MBPP02686 304 aaPredicted RBP12.05□□□□□ -0.48
RNF41-202ENST00000394013 CEACAM8P31997 349 aaPredicted RBP12.05□□□□□ -0.48
RNF41-202ENST00000394013 ECI1P42126 302 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 HLA-DRB3P79483 266 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 TGIF2LYQ8IUE0 185 aa12.05□□□□□ -0.48
RNF41-202ENST00000394013 LILRB1Q8NHL6 650 aaPredicted RBP12.05□□□□□ -0.48
RNF41-202ENST00000394013 BOD1Q96IK1 185 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms