RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 FAM27D1Q5T7N8 215 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ULK3Q6PHR2 472 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 SDIM1Q6ZPB5 146 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 FAM122BQ7Z309 247 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC35F6Q8N357 371 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 KRTCAP2Q8N6L1 136 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ZFAND2AQ8N6M9 145 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ARL6IP6Q8N6S5 226 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PQLC3Q8N755 202 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 OR10A6Q8NH74 314 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 CD200R1Q8TD46 325 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 DTD1Q8TEA8 209 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 DOK4Q8TEW6 326 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 KCTD4Q8WVF5 259 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 CLDN23Q96B33 292 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 REEP6Q96HR9 211 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 NAP1L5Q96NT1 182 aaPredicted RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ODF3Q96PU9 254 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PANX1Q96RD7 426 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PITX2Q99697 317 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 MRPL57Q9BQC6 102 aaKnown RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 C11orf70Q9BRQ4 267 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 TSSK6Q9BXA6 273 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PECRQ9BY49 303 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF436Q9C0F3 470 aaPredicted RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 NAA50Q9GZZ1 169 aaKnown RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC25A31Q9H0C2 315 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 SMDT1Q9H4I9 107 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 XKR8Q9H6D3 395 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 VCX3AQ9NNX9 186 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 FIS1Q9Y3D6 152 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 USH1CQ9Y6N9 552 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF638Q14966 1978 aaKnown RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PTPRJQ12913 1337 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 DIDO1Q9BTC0 2240 aaKnown RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 SHANK3Q9BYB0 1731 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 TRAV8-3A0A0A6YYJ7 113 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 IGHV2-26A0A0B4J1V2 119 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 TRBV6-5A0A0K0K1A5 114 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 A0A1B0GVG6 124 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 DHRS12A0PJE2 317 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 VPS37CA5D8V6 355 aaPredicted RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 TMEM235A6NFC5 223 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 SEC14L6B5MCN3 397 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 H3BPC8 53 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 K7EQS6 105 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 M0QXV9 152 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 WRBO00258 174 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF593O00488 134 aaPredicted RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 FBP1P09467 338 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC2A1P11166 492 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 PMCHP20382 165 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 GABRR2P28476 465 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 EVI2BP34910 448 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 INPP1P49441 399 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 PSMD4P55036 377 aaKnown RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ATP6V0D1P61421 351 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 GBE1Q04446 702 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 GLO1Q04760 184 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ATP6V1FQ16864 119 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 MAJINQ3KP22 176 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ACTBL2Q562R1 376 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 TMEM220Q6QAJ8 160 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 C2orf91Q6ZV80 131 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 OLIG3Q7RTU3 272 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 OR2W3Q7Z3T1 314 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 GLT6D1Q7Z4J2 308 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 SETD3Q86TU7 594 aaPredicted RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 CMTM8Q8IZV2 173 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 TRIML2Q8N7C3 387 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ASCC1Q8N9N2 400 aaKnown RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 TCP10LQ8TDR4 215 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 PIH1D2Q8WWB5 315 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 NELFBQ8WX92 580 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 TMIGD2Q96BF3 282 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 LINC01587Q99440 93 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 IL22Q9GZX6 179 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 IQCGQ9H095 443 aaKnown RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 GOLPH3Q9H4A6 298 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 CST9LQ9H4G1 147 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 NRBP2Q9NSY0 501 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 NMRK1Q9NWW6 199 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 RAB20Q9NX57 234 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 STK38LQ9Y2H1 464 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ALG5Q9Y673 324 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 AK9Q5TCS8 1911 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ATAD2BQ9ULI0 1458 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 ROS1P08922 2347 aa0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 MUC5BQ9HC84 5762 aaPredicted RBP0.14□□□□□ -2.39
SNORD28B-201ENST00000390993 KDM5BQ9UGL1 1544 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 TRPM6Q9BX84 2022 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 IGHV3-73A0A0B4J1V6 119 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 TRAV41A0A0B4J266 112 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 CTAGE15A4D2H0 777 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 E7EWF7 191 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 TEX46H3BTG2 121 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 I3L4J1 428 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 CASQ2O14958 399 aaPredicted RBP0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 TCF21O43680 179 aa0.13□□□□□ -2.39
SNORD28B-201ENST00000390993 MRPS14O60783 128 aaKnown RBP0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms