RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 KLK15Q9H2R5 256 aa9.16□□□□□ -0.94
SOD1-202ENST00000389995 PLEKHA1Q9HB21 404 aa9.16□□□□□ -0.94
SOD1-202ENST00000389995 SEBOXQ9HB31 216 aaPredicted RBP9.16□□□□□ -0.94
SOD1-202ENST00000389995 EXOSC4Q9NPD3 245 aaKnown RBP9.16□□□□□ -0.94
SOD1-202ENST00000389995 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
SOD1-202ENST00000389995 SIRT4Q9Y6E7 314 aaPredicted RBP9.16□□□□□ -0.94
SOD1-202ENST00000389995 IGKV1-12A0A0C4DH73 117 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 ZNF729A6NN14 1252 aaPredicted RBP9.15□□□□□ -0.94
SOD1-202ENST00000389995 H3BNX3 289 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 HSPB6O14558 160 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 SH2D1BO14796 132 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 LDLRAD4O15165 306 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 APOL3O95236 402 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 IGKV1D-12P01611 117 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 IGHG4P01861 327 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 KRT8P05787 483 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 ZNF44P15621 663 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 HTR1FP30939 366 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 INSL3P51460 131 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 GABPB1Q06547 395 aaPredicted RBP9.15□□□□□ -0.94
SOD1-202ENST00000389995 MADCAM1Q13477 382 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 ZIK1Q3SY52 487 aaPredicted RBP9.15□□□□□ -0.94
SOD1-202ENST00000389995 Q6ZSR3 168 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 ZNF429Q86V71 674 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 LILRB2Q8N423 598 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 YIPF7Q8N8F6 280 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 OR10H4Q8NGA5 316 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 RFESDQ8TAC1 157 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 RFKQ969G6 155 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 MOB1AQ9H8S9 216 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 HMG20AQ9NP66 347 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 PCDHB16Q9NRJ7 776 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 MRM2Q9UI43 246 aaKnown RBP9.15□□□□□ -0.94
SOD1-202ENST00000389995 AMMECR1Q9Y4X0 333 aaPredicted RBP9.15□□□□□ -0.94
SOD1-202ENST00000389995 SNX5Q9Y5X3 404 aa9.15□□□□□ -0.94
SOD1-202ENST00000389995 TRAV39A0A0B4J263 110 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 IGKV1-9A0A0C4DH69 117 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 KBTBD11-OT1A0A1B0GTJ5 212 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 ZNF736B4DX44 427 aaPredicted RBP9.14□□□□□ -0.95
SOD1-202ENST00000389995 I3L521 148 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 OVOL1O14753 267 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 SYT7O43581 403 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 ALPLP05186 524 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 OR8U8P0C7N1 319 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 OR2T7P0C7T2 308 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 CGB3P0DN86 165 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 CGB7P0DN87 165 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 IGHV4-30-4P0DP06 118 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 CCL1P22362 96 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 PSMB8P28062 276 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 GLP1RP43220 463 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 VEGFCP49767 419 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 ALDH3A2P51648 485 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 SLURP1P55000 103 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 ZNF616Q08AN1 781 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 KIAA0141Q14154 515 aaPredicted RBP9.14□□□□□ -0.95
SOD1-202ENST00000389995 SPIN3Q5JUX0 258 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 LHFPL2Q6ZUX7 228 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 SSX6Q7RTT6 188 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 TGIF2LXQ8IUE1 241 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 Q8IYB0 196 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 CBR4Q8N4T8 237 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 Q8N6K4 173 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 OR13A1Q8NGR1 328 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
SOD1-202ENST00000389995 EME1Q96AY2 570 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 KCTD7Q96MP8 289 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 SPACA5Q96QH8 159 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 GON7Q9BXV9 100 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 CHST5Q9GZS9 411 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 PLSCR3Q9NRY6 295 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 LIN7CQ9NUP9 197 aaKnown RBP9.14□□□□□ -0.95
SOD1-202ENST00000389995 CALYQ9NYX4 217 aa9.14□□□□□ -0.95
SOD1-202ENST00000389995 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 A0A1W2PQL4 384 aaPredicted RBP9.13□□□□□ -0.95
SOD1-202ENST00000389995 FUOMA2VDF0 154 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 RBMY1BA6NDE4 496 aaKnown RBP9.13□□□□□ -0.95
SOD1-202ENST00000389995 RBMY1EA6NEQ0 496 aaKnown RBP9.13□□□□□ -0.95
SOD1-202ENST00000389995 DHRS7CA6NNS2 312 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 SLC33A1O00400 549 aaPredicted RBP9.13□□□□□ -0.95
SOD1-202ENST00000389995 HSD17B6O14756 317 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 GATBO75879 557 aaKnown RBP9.13□□□□□ -0.95
SOD1-202ENST00000389995 RBMY1DP0C7P1 496 aaKnown RBP9.13□□□□□ -0.95
SOD1-202ENST00000389995 VDAC1P21796 283 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 RBP2P50120 134 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 RAB7AP51149 207 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 ATP1B3P54709 279 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 MTCP1P56278 107 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 TMED1Q13445 227 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 EBI3Q14213 229 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 Q6P435 159 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 FAM220AQ7Z4H9 259 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 RDH10Q8IZV5 341 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 OR8H3Q8N146 312 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 Q8N1Y9 231 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 OR5D18Q8NGL1 313 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 OR10X1Q8NGY0 326 aa9.13□□□□□ -0.95
SOD1-202ENST00000389995 TRUB1Q8WWH5 349 aaKnown RBP9.13□□□□□ -0.95
SOD1-202ENST00000389995 C9orf16Q9BUW7 83 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms