RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 Q9N2K0 584 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 IL36RNQ9UBH0 155 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 STRAPQ9Y3F4 350 aaKnown RBP11.87□□□□□ -0.51
NEK4-202ENST00000383721 RFNGQ9Y644 331 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 TMEM56-RWDD3S4R434 201 aa11.87□□□□□ -0.51
NEK4-202ENST00000383721 IGKV3D-15A0A087WSY6 115 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 IGSF23A1L1A6 192 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 C7orf77A4D0Y5 90 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A10PA6NDY2 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A18PA6NE21 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A16PA6NEW6 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A20PA6NIJ5 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A8PA6NJQ4 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A7PA6NKC0 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A22PA8MWA6 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A12PA8MX19 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A5PA8MXJ8 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A23PA8MXZ1 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 K7N7A8 449 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 NAPSAO96009 420 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 HLA-HP01893 362 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A15PP0C7V4 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A13PP0C7W8 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A14PP0C7W9 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FAM90A24PP0C7X0 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 HAAOP46952 286 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FOXG1P55316 489 aaPredicted RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 SRPXP78539 464 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 SSPNQ14714 243 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 HERPUD1Q15011 391 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 C12orf57Q99622 126 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 RYDENQ9NUL5 291 aaKnown RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 UBE2J1Q9Y385 318 aaPredicted RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 URB1O60287 2271 aaKnown RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 SNRNP70P08621 437 aaKnown RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 PPP1CCP36873 323 aaKnown RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 EIF2S3P41091 472 aaKnown RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 GPM6AP51674 278 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 FGF12P61328 243 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 ZNF818PQ6ZRF7 136 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 SELENOHQ8IZQ5 122 aaKnown RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 SNIP1Q8TAD8 396 aaKnown RBP11.86□□□□□ -0.51
NEK4-202ENST00000383721 SFT2D1Q8WV19 159 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 PRRG4Q9BZD6 226 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 ATPIF1Q9UII2 106 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 RAXQ9Y2V3 346 aa11.86□□□□□ -0.51
NEK4-202ENST00000383721 IGKV1D-13A0A0B4J2D9 117 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 ZNF503-AS2A6NEH8 195 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 TK1P04183 234 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 CELA3AP09093 270 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 IGKV1-13P0DP09 117 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 NKX2-1P43699 371 aaPredicted RBP11.85□□□□□ -0.51
NEK4-202ENST00000383721 SRYQ05066 204 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 CLINT1Q14677 625 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 ZNF695Q8IW36 515 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 GAPTQ8N292 157 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
NEK4-202ENST00000383721 FAM213BQ8TBF2 198 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 C20orf24Q9BUV8 137 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 MTCH1Q9NZJ7 389 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 LRFN1Q9P244 771 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 A0A1B0GV50 99 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 C5orf49A4QMS7 147 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 SLC22A20A6NK97 555 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 ZNF44P15621 663 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 RND3P61587 244 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 TSC22D1Q15714 1073 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 SRSF7Q16629 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
NEK4-202ENST00000383721 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
NEK4-202ENST00000383721 KDF1Q8NAX2 398 aaPredicted RBP11.85□□□□□ -0.51
NEK4-202ENST00000383721 TMEM171Q8WVE6 324 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 LINC00470Q9BZP3 86 aa11.85□□□□□ -0.51
NEK4-202ENST00000383721 IGKV1-6A0A0C4DH72 117 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 HSPB6O14558 160 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 DAOP14920 347 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 OMGP23515 440 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 PTAFRP25105 342 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 LHX2P50458 406 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 RAB5BP61020 215 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 CEACAM21Q3KPI0 293 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 SPACA3Q8IXA5 215 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 TUSC5Q8IXB3 177 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 SAXO1Q8IYX7 474 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 ZNF565Q8N9K5 539 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 MAGT1Q9H0U3 335 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 BOKQ9UMX3 212 aaPredicted RBP11.84□□□□□ -0.51
NEK4-202ENST00000383721 ZNF724A8MTY0 619 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 ZNF732B4DXR9 585 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 UMAD1C9J7I0 102 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 M0R036 132 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 ADAM20O43506 726 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 SSSCA1O60232 199 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 TUSC2O75896 110 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 ATP6V0CP27449 155 aa11.84□□□□□ -0.51
NEK4-202ENST00000383721 MRPL21Q7Z2W9 205 aaKnown RBP11.84□□□□□ -0.51
NEK4-202ENST00000383721 ZDHHC23Q8IYP9 409 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms