RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 LINC00527Q9UJ94 153 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 ING4Q9UNL4 249 aa11.25□□□□□ -0.61
SHOX-202ENST00000381575 RPL36Q9Y3U8 105 aaKnown RBP11.25□□□□□ -0.61
SHOX-202ENST00000381575 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
SHOX-202ENST00000381575 NBEAL2Q6ZNJ1 2754 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 DNAH9Q9NYC9 4486 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 A0A1W2PP11 408 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 A0A1W2PPI3 338 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 BAG2O95816 211 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 MPIG6BO95866 241 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 MRPL28Q13084 256 aaKnown RBP11.24□□□□□ -0.61
SHOX-202ENST00000381575 IL13RA2Q14627 380 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 KLHL22Q53GT1 634 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 DDI2Q5TDH0 399 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 CCDC144NLQ6NUI1 221 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 ZFP41Q8N8Y5 198 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 SUMF2Q8NBJ7 301 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 OR4X2Q8NGF9 303 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 GPR148Q8TDV2 347 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 CREB3L1Q96BA8 519 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 NOL4LQ96MY1 436 aaPredicted RBP11.24□□□□□ -0.61
SHOX-202ENST00000381575 MYCBPQ99417 103 aaPredicted RBP11.24□□□□□ -0.61
SHOX-202ENST00000381575 DPCDQ9BVM2 203 aaPredicted RBP11.24□□□□□ -0.61
SHOX-202ENST00000381575 MRPS18AQ9NVS2 196 aaKnown RBP11.24□□□□□ -0.61
SHOX-202ENST00000381575 MOB4Q9Y3A3 225 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
SHOX-202ENST00000381575 HSPE1-MOB4S4R3N1 261 aa11.24□□□□□ -0.61
SHOX-202ENST00000381575 IGHV3-72A0A0B4J1Y9 119 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 MAGEA13PA6NCF6 341 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 OR7C1O76099 320 aaPredicted RBP11.23□□□□□ -0.61
SHOX-202ENST00000381575 LALBAP00709 142 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 SERPINA2P20848 420 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 C21orf33P30042 268 aaPredicted RBP11.23□□□□□ -0.61
SHOX-202ENST00000381575 REG1BP48304 166 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 LOXL3P58215 753 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 ZNF565Q8N9K5 539 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 BARHL1Q9BZE3 327 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 FGF20Q9NP95 211 aaPredicted RBP11.23□□□□□ -0.61
SHOX-202ENST00000381575 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 ST3GAL6Q9Y274 331 aa11.23□□□□□ -0.61
SHOX-202ENST00000381575 IGHV3-43A0A0B4J1X8 118 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A18PA6NE21 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A16PA6NEW6 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A20PA6NIJ5 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A9PA6NNJ1 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A12PA8MX19 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A5PA8MXJ8 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 OOSP1A8MZH6 123 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 NPIPB11E5RHQ5 1161 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 GEMIN2O14893 280 aaKnown RBP11.22□□□□□ -0.61
SHOX-202ENST00000381575 CD2P06729 351 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A15PP0C7V4 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A13PP0C7W8 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A14PP0C7W9 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM90A24PP0C7X0 464 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 FAM106CPP0CH98 169 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 IGHV3-43DP0DP04 118 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 TMEM11P17152 192 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 RBM11P57052 281 aaKnown RBP11.22□□□□□ -0.61
SHOX-202ENST00000381575 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
SHOX-202ENST00000381575 ASCL4Q6XD76 172 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 WFDC9Q8NEX5 89 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 OR10X1Q8NGY0 326 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 CCDC107Q8WV48 283 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 CPNE2Q96FN4 548 aaPredicted RBP11.22□□□□□ -0.61
SHOX-202ENST00000381575 CYYR1Q96J86 154 aa11.22□□□□□ -0.61
SHOX-202ENST00000381575 PNMA8CA0A1B0GUJ8 204 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 PSMB11A5LHX3 300 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 IGKV1D-33P01593 117 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 IGKV1-33P01594 117 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 HOXD3P31249 432 aaPredicted RBP11.21□□□□□ -0.61
SHOX-202ENST00000381575 ZNF93P35789 620 aaPredicted RBP11.21□□□□□ -0.61
SHOX-202ENST00000381575 PPP3R1P63098 170 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 LRRC36Q1X8D7 754 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 SLC22A6Q4U2R8 563 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 ATAD3CQ5T2N8 411 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 ETV3LQ6ZN32 361 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 OSR2Q8N2R0 312 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 C5orf56Q8N8D9 126 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 ZNF555Q8NEP9 628 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 Q8NFD4 153 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 OR52N1Q8NH53 320 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 NEK7Q8TDX7 302 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 CYGBQ8WWM9 190 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 METTL9Q9H1A3 318 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.61
SHOX-202ENST00000381575 SMPD3Q9NY59 655 aaPredicted RBP11.21□□□□□ -0.61
SHOX-202ENST00000381575 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.21□□□□□ -0.61
SHOX-202ENST00000381575 TRAV8-7A0A075B6U6 113 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 A0A1W2PPK0 400 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 K7EIL1 84 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 M0QZK8 103 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 HSD17B6O14756 317 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 CSTBP04080 98 aaKnown RBP11.2□□□□□ -0.62
SHOX-202ENST00000381575 BDKRB2P30411 391 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 KRTAP10-11P60412 298 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 SLC35A2P78381 396 aa11.2□□□□□ -0.62
SHOX-202ENST00000381575 TMPRSS11AQ6ZMR5 421 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms