RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
PDGFB-202ENST00000381551 KCNK7Q9Y2U2 307 aa12.73□□□□□ -0.37
PDGFB-202ENST00000381551 SVEP1Q4LDE5 3571 aa12.73□□□□□ -0.37
PDGFB-202ENST00000381551 MEIKINA0A087WXM9 373 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 TMEM30CPA0ZSE6 113 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 MEX3AA1L020 520 aaKnown RBP12.72□□□□□ -0.37
PDGFB-202ENST00000381551 SCGNO76038 276 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 CGB3P0DN86 165 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 CGB7P0DN87 165 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 DLX6P56179 175 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 CR1LQ2VPA4 569 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 MZT2AQ6P582 158 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 ZNF565Q8N9K5 539 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 S100A16Q96FQ6 103 aaKnown RBP12.72□□□□□ -0.37
PDGFB-202ENST00000381551 SLIRPQ9GZT3 109 aaKnown RBP12.72□□□□□ -0.37
PDGFB-202ENST00000381551 UBE2J1Q9Y385 318 aaPredicted RBP12.72□□□□□ -0.37
PDGFB-202ENST00000381551 KPTNQ9Y664 436 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 AUP1Q9Y679 476 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 LINC00312Q9Y6C7 94 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 DSCAML1Q8TD84 2053 aa12.72□□□□□ -0.37
PDGFB-202ENST00000381551 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 A0A0A6YYH2 397 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 A0A1W2PPH5 198 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 A6NJ64 397 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 C17orf98A8MV24 154 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 APOA1P02647 267 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 ZNF728P0DKX0 622 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 MMP9P14780 707 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 GNB3P16520 340 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 CCL3L1P16619 93 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 OLFML2AQ68BL7 652 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 C1orf229Q6ZS94 237 aaPredicted RBP12.71□□□□□ -0.37
PDGFB-202ENST00000381551 Q71RC1 249 aaPredicted RBP12.71□□□□□ -0.37
PDGFB-202ENST00000381551 KIR3DL3Q8N743 410 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 Q8N7P7 452 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 WDFY2Q96P53 400 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 SIRPDQ9H106 197 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 ZMAT3Q9HA38 289 aaKnown RBP12.71□□□□□ -0.37
PDGFB-202ENST00000381551 DIABLOQ9NR28 239 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 OR6C3Q9NZP0 311 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 ONECUT1Q9UBC0 465 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 AK3Q9UIJ7 227 aa12.71□□□□□ -0.37
PDGFB-202ENST00000381551 KIAA2026Q5HYC2 2103 aa12.71□□□□□ -0.38
PDGFB-202ENST00000381551 A0A075B6Q4 140 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 TRAV39A0A0B4J263 110 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 M0R1W7 72 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 MFNGO00587 321 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 CTDSP2O14595 271 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 HPGDSO60760 199 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 TOX4O94842 621 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 NAPSAO96009 420 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 EIF4EP06730 217 aaKnown RBP12.7□□□□□ -0.38
PDGFB-202ENST00000381551 HIST1H1DP16402 221 aaKnown RBP12.7□□□□□ -0.38
PDGFB-202ENST00000381551 GZMHP20718 246 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 ERVFRD-1P60508 538 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 ARL6IP1Q15041 203 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 CDNFQ49AH0 187 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 FAM120AOSQ5T036 256 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 METTL11BQ5VVY1 283 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 OR13A1Q8NGR1 328 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 OR4K15Q8NH41 348 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 MRPL30Q8TCC3 161 aaKnown RBP12.7□□□□□ -0.38
PDGFB-202ENST00000381551 CCDC107Q8WV48 283 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 ZNF714Q96N38 554 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 DCUN1D5Q9BTE7 237 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 NXF2Q9GZY0 626 aaKnown RBP12.7□□□□□ -0.38
PDGFB-202ENST00000381551 RIMS4Q9H426 269 aaPredicted RBP12.7□□□□□ -0.38
PDGFB-202ENST00000381551 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDGFB-202ENST00000381551 TMEM160Q9NX00 188 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 TAS2R3Q9NYW6 316 aa12.7□□□□□ -0.38
PDGFB-202ENST00000381551 TRAV18A0A075B6X5 111 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 XRCC3O43542 346 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 ELK1P19419 428 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 PRTN3P24158 256 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 CDK2P24941 298 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 C17orf58Q2M2W7 97 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 ZNF260Q3ZCT1 412 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 TRAPPC6BQ86SZ2 158 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 UPRTQ96BW1 309 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 TBX15Q96SF7 602 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 PCGF1Q9BSM1 259 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 LINC00574Q9H8X3 128 aa12.69□□□□□ -0.38
PDGFB-202ENST00000381551 UNKLQ9H9P5 680 aaKnown RBP12.69□□□□□ -0.38
PDGFB-202ENST00000381551 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 KBTBD11-OT1A0A1B0GTJ5 212 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 hCG_1809904A0A1W2PP81 198 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 A0A1W2PPE2 198 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 A0A1W2PR64 198 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 A0A1W2PRV1 198 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 ZNF729A6NN14 1252 aaPredicted RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 POM121CA8CG34 1229 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 SERPINE3A8MV23 424 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 RBP4P02753 201 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 GSTP1P09211 210 aaKnown RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 RCC1P18754 421 aaPredicted RBP12.68□□□□□ -0.38
PDGFB-202ENST00000381551 Q6ZPA2 131 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
PDGFB-202ENST00000381551 MCFD2Q8NI22 146 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms