RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 DYNC1I2Q13409 638 aaKnown RBP7.53□□□□□ -1.2
HMGN1-202ENST00000380747 TAF9Q16594 264 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 MPV17LQ2QL34 196 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 NHLRC3Q5JS37 347 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 UBE2UQ5VVX9 321 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 Q6YL49 198 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 LINC00596Q86U02 117 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 LYPD6Q86Y78 171 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 SUMF2Q8NBJ7 301 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 NEK7Q8TDX7 302 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 FCGR1BQ92637 280 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 FAM46BQ96A09 425 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 SLC25A28Q96A46 364 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 C1orf147Q96MC9 270 aaPredicted RBP7.53□□□□□ -1.2
HMGN1-202ENST00000380747 DPCDQ9BVM2 203 aaPredicted RBP7.53□□□□□ -1.2
HMGN1-202ENST00000380747 BARHL1Q9BZE3 327 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 SELENOIQ9C0D9 397 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 GAL3ST2Q9H3Q3 398 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 KIF25Q9UIL4 384 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 UBE2J1Q9Y385 318 aaPredicted RBP7.53□□□□□ -1.2
HMGN1-202ENST00000380747 DOCK11Q5JSL3 2073 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 NOTCH1P46531 2555 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 MEIKINA0A087WXM9 373 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 TMEM89A2RUT3 159 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 CCRL2O00421 344 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 CLPXO76031 633 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 RBP4P02753 201 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 UBBP0CG47 229 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 HTR2CP28335 458 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 GLP1RP43220 463 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 LGALS4P56470 323 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 KCTD21Q4G0X4 260 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 PRR31Q5SQ13 230 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 C1orf100Q5SVJ3 147 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 PRAMEF5Q5TYX0 476 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 C3orf56Q8N813 242 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 TMEM104Q8NE00 496 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 OR13D1Q8NGV5 346 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 PLPPR1Q8TBJ4 325 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 FAM216AQ8WUB2 273 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 MRPS24Q96EL2 167 aaKnown RBP7.52□□□□□ -1.21
HMGN1-202ENST00000380747 CST11Q9H112 138 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 PRDM13Q9H4Q3 707 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
HMGN1-202ENST00000380747 PLGRKTQ9HBL7 147 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 NDUFB11Q9NX14 153 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 TAS2R3Q9NYW6 316 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 OR6C3Q9NZP0 311 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 GHRLQ9UBU3 117 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 AK6Q9Y3D8 172 aaKnown RBP7.52□□□□□ -1.21
HMGN1-202ENST00000380747 SESN1Q9Y6P5 492 aa7.52□□□□□ -1.21
HMGN1-202ENST00000380747 TRAV39A0A0B4J263 110 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 TMEM30CPA0ZSE6 113 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 CLDN34H7C241 214 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 MMP23AO75900 390 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 MPIG6BO95866 241 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 IGHV4-59P01825 116 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 ARG1P05089 322 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 RNASE1P07998 156 aaKnown RBP7.51□□□□□ -1.21
HMGN1-202ENST00000380747 OMGP23515 440 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 MYL9P24844 172 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 CDK2P24941 298 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 KCNJ3P48549 501 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 P2RY14Q15391 338 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 NEDD8Q15843 81 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 MIDNQ504T8 468 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 RSBN1Q5VWQ0 802 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-202ENST00000380747 C22orf42Q6IC83 251 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 OR10K2Q6IF99 312 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 LDLRAD3Q86YD5 345 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 OR6M1Q8NGM8 313 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 OR13A1Q8NGR1 328 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 MRGPRDQ8TDS7 321 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 C17orf50Q8WW18 174 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 SSMEM1Q8WWF3 244 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 CORO2AQ92828 525 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 GCDHQ92947 438 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-202ENST00000380747 GFI1Q99684 422 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 TMEM133Q9H2Q1 129 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 KCNK15Q9H427 330 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 IFT22Q9H7X7 185 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 SPACA1Q9HBV2 294 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 PEX16Q9Y5Y5 336 aa7.51□□□□□ -1.21
HMGN1-202ENST00000380747 TRDV1A0A1B0GX56 115 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 UBE2QL1A1L167 161 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM172BPA6NC97 362 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A10PA6NDY2 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 BTBD17A6NE02 478 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A18PA6NE21 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A16PA6NEW6 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A20PA6NIJ5 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A8PA6NJQ4 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A7PA6NKC0 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 ZNF729A6NN14 1252 aaPredicted RBP7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A22PA8MWA6 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A12PA8MX19 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A5PA8MXJ8 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 FAM90A23PA8MXZ1 464 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 MCRIP1C9JLW8 97 aa7.5□□□□□ -1.21
HMGN1-202ENST00000380747 SLC17A2O00624 439 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms